RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SPATA13Q96N96 652 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 PEBP4Q96S96 227 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 MRPL1Q9BYD6 325 aaKnown RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 NIFKQ9BYG3 293 aaKnown RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 SDCBP2Q9H190 292 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 ATXN3LQ9H3M9 355 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 SETD4Q9NVD3 440 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 ZNF358Q9NW07 568 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 IRAK4Q9NWZ3 460 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 SLC7A8Q9UHI5 535 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 LNPEPQ9UIQ6 1025 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 NOD1Q9Y239 953 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 FARP1Q9Y4F1 1045 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 SLC15A5A6NIM6 579 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 C2CD4BA6NLJ0 364 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 H3BRB1 525 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 LIN7AO14910 233 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 THRAP10827 490 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 EPHA3P29320 983 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 ABL2P42684 1182 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 ACADSBP45954 432 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 NAGLUP54802 743 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 NME5P56597 212 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 CYLC2Q14093 348 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 VGLL4Q14135 290 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 KRT72Q14CN4 511 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 KYAT1Q16773 422 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 PAN2Q504Q3 1202 aaKnown RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 FBXO47Q5MNV8 452 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 TREML1Q86YW5 311 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 SCN4BQ8IWT1 228 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 SPATA6LQ8N4H0 392 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 NIPA2Q8N8Q9 360 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 PDZD8Q8NEN9 1154 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 CMASQ8NFW8 434 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 CLEC4CQ8WTT0 213 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 RNF139Q8WU17 664 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 APBA2Q99767 749 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 NAT9Q9BTE0 207 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 CCDC68Q9H2F9 335 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 MMADHCQ9H3L0 296 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 TUT1Q9H6E5 874 aaKnown RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 WDR55Q9H6Y2 383 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 MINDY3Q9H8M7 445 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 COPS7BQ9H9Q2 264 aaPredicted RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 DDX18Q9NVP1 670 aaKnown RBP7.01□□□□□ -1.29
RTN4-203ENST00000357376 CLIC5Q9NZA1 410 aa7.01□□□□□ -1.29
RTN4-203ENST00000357376 DCAF8L1A6NGE4 600 aa7□□□□□ -1.29
RTN4-203ENST00000357376 AKAP10O43572 662 aa7□□□□□ -1.29
RTN4-203ENST00000357376 TRIM13O60858 407 aa7□□□□□ -1.29
RTN4-203ENST00000357376 EDN1P05305 212 aa7□□□□□ -1.29
RTN4-203ENST00000357376 MYL3P08590 195 aa7□□□□□ -1.29
RTN4-203ENST00000357376 DLDP09622 509 aaKnown RBP7□□□□□ -1.29
RTN4-203ENST00000357376 PAMP19021 973 aa7□□□□□ -1.29
RTN4-203ENST00000357376 EEF1B2P24534 225 aaKnown RBP7□□□□□ -1.29
RTN4-203ENST00000357376 GPD2P43304 727 aa7□□□□□ -1.29
RTN4-203ENST00000357376 SLC18A1P54219 525 aa7□□□□□ -1.29
RTN4-203ENST00000357376 ESRRGP62508 458 aa7□□□□□ -1.29
RTN4-203ENST00000357376 DGKDQ16760 1214 aa7□□□□□ -1.29
RTN4-203ENST00000357376 CELF3Q5SZQ8 465 aaKnown RBP7□□□□□ -1.29
RTN4-203ENST00000357376 PTAR1Q7Z6K3 402 aaPredicted RBP7□□□□□ -1.29
RTN4-203ENST00000357376 CERS2Q96G23 380 aa7□□□□□ -1.29
RTN4-203ENST00000357376 C7orf26Q96N11 449 aa7□□□□□ -1.29
RTN4-203ENST00000357376 ZNF670Q9BS34 389 aa7□□□□□ -1.29
RTN4-203ENST00000357376 CAAP1Q9H8G2 361 aa7□□□□□ -1.29
RTN4-203ENST00000357376 TSR3Q9UJK0 312 aaKnown RBP7□□□□□ -1.29
RTN4-203ENST00000357376 TEX264Q9Y6I9 313 aa7□□□□□ -1.29
RTN4-203ENST00000357376 ITM2AO43736 263 aa7□□□□□ -1.29
RTN4-203ENST00000357376 AHCYL1O43865 530 aa7□□□□□ -1.29
RTN4-203ENST00000357376 SIN3BO75182 1162 aa7□□□□□ -1.29
RTN4-203ENST00000357376 SLC25A27O95847 323 aa7□□□□□ -1.29
RTN4-203ENST00000357376 CLPTM1O96005 669 aa7□□□□□ -1.29
RTN4-203ENST00000357376 LYNP07948 512 aa7□□□□□ -1.29
RTN4-203ENST00000357376 CYP2C8P10632 490 aa7□□□□□ -1.29
RTN4-203ENST00000357376 FGFR1P11362 822 aa7□□□□□ -1.29
RTN4-203ENST00000357376 CYP2C9P11712 490 aa7□□□□□ -1.29
RTN4-203ENST00000357376 TAF6P49848 677 aa7□□□□□ -1.29
RTN4-203ENST00000357376 PLK1P53350 603 aa7□□□□□ -1.29
RTN4-203ENST00000357376 WASHC5Q12768 1159 aa7□□□□□ -1.29
RTN4-203ENST00000357376 PDAP1Q13442 181 aaKnown RBP7□□□□□ -1.29
RTN4-203ENST00000357376 DPY19L2Q6NUT2 758 aa7□□□□□ -1.29
RTN4-203ENST00000357376 NOTUMQ6P988 496 aa7□□□□□ -1.29
RTN4-203ENST00000357376 ARCQ7LC44 396 aa7□□□□□ -1.29
RTN4-203ENST00000357376 LCA5Q86VQ0 697 aa7□□□□□ -1.29
RTN4-203ENST00000357376 KCNMB4Q86W47 210 aa7□□□□□ -1.29
RTN4-203ENST00000357376 DDIASQ8IXT1 998 aa7□□□□□ -1.29
RTN4-203ENST00000357376 ADGRF2Q8IZF7 708 aa7□□□□□ -1.29
RTN4-203ENST00000357376 JADE3Q92613 823 aa7□□□□□ -1.29
RTN4-203ENST00000357376 AZIN2Q96A70 460 aa7□□□□□ -1.29
RTN4-203ENST00000357376 P2RY11Q96G91 374 aa7□□□□□ -1.29
RTN4-203ENST00000357376 FAXDC2Q96IV6 333 aa7□□□□□ -1.29
RTN4-203ENST00000357376 CSPG4P5Q96PW8 444 aa7□□□□□ -1.29
RTN4-203ENST00000357376 GPR20Q99678 358 aa7□□□□□ -1.29
RTN4-203ENST00000357376 NACA2Q9H009 215 aa7□□□□□ -1.29
RTN4-203ENST00000357376 NMRAL1Q9HBL8 299 aa7□□□□□ -1.29
RTN4-203ENST00000357376 PFDN4Q9NQP4 134 aa7□□□□□ -1.29
RTN4-203ENST00000357376 SNX15Q9NRS6 342 aa7□□□□□ -1.29
RTN4-203ENST00000357376 PPM1HQ9ULR3 514 aa7□□□□□ -1.29
RTN4-203ENST00000357376 LRRC42Q9Y546 428 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms