RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 SERPINB11Q96P15 392 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 SCNM1Q9BWG6 230 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 ADAM33Q9BZ11 813 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 PCED1AQ9H1Q7 454 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 LHX5Q9H2C1 402 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 FBRSQ9HAH7 460 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 UBE2TQ9NPD8 197 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-204ENST00000356316 STIM2Q9P246 746 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 NCKAP1Q9Y2A7 1128 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 TLR6Q9Y2C9 796 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 GON4LQ3T8J9 2241 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 GOLGA6L7A0A1B0GV03 622 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 TMEM8BA6NDV4 472 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 C1QTNF9BB2RNN3 333 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 RNASEH1O60930 286 aaKnown RBP11.07□□□□□ -0.64
CAPN3-204ENST00000356316 MOCS3O95396 460 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 IGLV3-19P01714 112 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 DLDP09622 509 aaKnown RBP11.07□□□□□ -0.64
CAPN3-204ENST00000356316 C1QTNF9P0C862 333 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 CD59P13987 128 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 ZBTB16Q05516 673 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 GRIK2Q13002 908 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 MORC3Q14149 939 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 ZNF423Q2M1K9 1284 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 TTC31Q49AM3 519 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-204ENST00000356316 RFWD3Q6PCD5 774 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 ENOSF1Q7L5Y1 443 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 ARHGEF19Q8IW93 802 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 MFN1Q8IWA4 741 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 TRIM59Q8IWR1 403 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 CARNMT1Q8N4J0 409 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 HJURPQ8NCD3 748 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-204ENST00000356316 LMO3Q8TAP4 145 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 GANCQ8TET4 914 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 SETD7Q8WTS6 366 aaKnown RBP11.07□□□□□ -0.64
CAPN3-204ENST00000356316 CLEC4CQ8WTT0 213 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 KAT5Q92993 513 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 FAM81BQ96LP2 452 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 MED15Q96RN5 788 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 INTS2Q9H0H0 1204 aaKnown RBP11.07□□□□□ -0.64
CAPN3-204ENST00000356316 TMEM245Q9H330 911 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 SLC12A6Q9UHW9 1150 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 EIF2B4Q9UI10 523 aaKnown RBP11.07□□□□□ -0.64
CAPN3-204ENST00000356316 NEUROG3Q9Y4Z2 214 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 CHD8Q9HCK8 2581 aa11.07□□□□□ -0.64
CAPN3-204ENST00000356316 ASCC3Q8N3C0 2202 aaKnown RBP11.07□□□□□ -0.64
CAPN3-204ENST00000356316 HYAL3O43820 417 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-204ENST00000356316 SH3BP5O60239 455 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 LETM1O95202 739 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-204ENST00000356316 CER1O95813 267 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 TOP3BO95985 862 aaKnown RBP11.06□□□□□ -0.64
CAPN3-204ENST00000356316 CALCAP01258 141 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 IGLV3-27P01718 113 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 APOEP02649 317 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 ASLP04424 464 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 SLC6A4P31645 630 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 CD70P32970 193 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 USP8P40818 1118 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 MATKP42679 507 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 GPD2P43304 727 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 AFF3P51826 1226 aaKnown RBP11.06□□□□□ -0.64
CAPN3-204ENST00000356316 MARSP56192 900 aaKnown RBP11.06□□□□□ -0.64
CAPN3-204ENST00000356316 CDH18Q13634 790 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 SUZ12Q15022 739 aaKnown RBP11.06□□□□□ -0.64
CAPN3-204ENST00000356316 TEAD4Q15561 434 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 RNF219Q5W0B1 726 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-204ENST00000356316 KIAA0907Q7Z7F0 614 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-204ENST00000356316 NAXDQ8IW45 347 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 ZNF366Q8N895 744 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.06□□□□□ -0.64
CAPN3-204ENST00000356316 FIBINQ8TAL6 211 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 STK32AQ8WU08 396 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 BTBD1Q9H0C5 482 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 GAREM1Q9H706 876 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 PRSS16Q9NQE7 514 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 TJP2Q9UDY2 1190 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 SCML1Q9UN30 329 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 NAALADL1Q9UQQ1 740 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 CEP83Q9Y592 693 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 TPRP12270 2363 aaKnown RBP11.06□□□□□ -0.64
CAPN3-204ENST00000356316 PCDH15Q96QU1 1955 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 EPG5Q9HCE0 2579 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 CKAP5Q14008 2032 aa11.06□□□□□ -0.64
CAPN3-204ENST00000356316 THAP12O43422 761 aa11.05□□□□□ -0.64
CAPN3-204ENST00000356316 SEMA4FO95754 770 aa11.05□□□□□ -0.64
CAPN3-204ENST00000356316 MOCS2O96007 188 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-204ENST00000356316 BMP6P22004 513 aa11.05□□□□□ -0.64
CAPN3-204ENST00000356316 ACSL1P33121 698 aa11.05□□□□□ -0.64
CAPN3-204ENST00000356316 NNMTP40261 264 aa11.05□□□□□ -0.64
CAPN3-204ENST00000356316 SGSHP51688 502 aa11.05□□□□□ -0.64
CAPN3-204ENST00000356316 RPS14P62263 151 aaKnown RBP11.05□□□□□ -0.64
CAPN3-204ENST00000356316 YWHAZP63104 245 aaKnown RBP11.05□□□□□ -0.64
CAPN3-204ENST00000356316 NNTQ13423 1086 aa11.05□□□□□ -0.64
CAPN3-204ENST00000356316 PTPRNQ16849 979 aa11.05□□□□□ -0.64
CAPN3-204ENST00000356316 HLA-BQ31612 363 aa11.05□□□□□ -0.64
CAPN3-204ENST00000356316 FAM133BQ5BKY9 247 aaKnown RBP11.05□□□□□ -0.64
CAPN3-204ENST00000356316 ZNF776Q68DI1 518 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-204ENST00000356316 LRSAM1Q6UWE0 723 aa11.05□□□□□ -0.64
CAPN3-204ENST00000356316 CFAP52Q8N1V2 620 aa11.05□□□□□ -0.64
CAPN3-204ENST00000356316 KDF1Q8NAX2 398 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms