RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 TMEM247A6NEH6 219 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 TLR3O15455 904 aaKnown RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 KRT14P02533 472 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 KRT1P04264 644 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 ITGAVP06756 1048 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 FESP07332 822 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 MMP3P08254 477 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 INSRRP14616 1297 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 PCK1P35558 622 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 MDH1P40925 334 aaKnown RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 TNFSF9P41273 254 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 VPS41P49754 854 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 MPP1Q00013 466 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 MTFR1Q15390 333 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 CNGA2Q16280 664 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 DGKDQ16760 1214 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 CCDC142Q17RM4 750 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 FAM26DQ5JW98 314 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 CEP85LQ5SZL2 805 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 INTS11Q5TA45 600 aaKnown RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 SPOPLQ6IQ16 392 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 IKBIPQ70UQ0 350 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 NUP54Q7Z3B4 507 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 CCDC105Q8IYK2 499 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 NKAPQ8N5F7 415 aaKnown RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 CPA5Q8WXQ8 436 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 MCRS1Q96EZ8 462 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 SERPINB12Q96P63 405 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 SLITRK1Q96PX8 696 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 TSEN34Q9BSV6 310 aaKnown RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 CELF4Q9BZC1 486 aaKnown RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 OSBPL8Q9BZF1 889 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 SIX4Q9UIU6 781 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 GOLGA6L7A0A1B0GV03 622 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 ARHGAP10A1A4S6 786 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 GOLGA8MH3BSY2 632 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 STAG3L1P0CL83 205 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 IVDP26440 423 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 HOXC8P31273 242 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 ADH7P40394 386 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 KPNA1P52294 538 aaPredicted RBP8.37□□□□□ -1.07
COMMD9-202ENST00000355500 RNASE9P60153 205 aaKnown RBP8.37□□□□□ -1.07
COMMD9-202ENST00000355500 PPP2R2AP63151 447 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 RBP5P82980 135 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 UNC93AQ86WB7 457 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 P3H4Q92791 437 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 ELAC2Q9BQ52 826 aaKnown RBP8.37□□□□□ -1.07
COMMD9-202ENST00000355500 C11orf70Q9BRQ4 267 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 ADPGKQ9BRR6 497 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 ZFATQ9P243 1243 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 LGALS13Q9UHV8 139 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 C5orf60A6NFR6 353 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 HNRNPCL2B2RXH8 293 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 HNRNPCL1O60812 293 aaKnown RBP8.37□□□□□ -1.07
COMMD9-202ENST00000355500 SNAI1O95863 264 aaPredicted RBP8.37□□□□□ -1.07
COMMD9-202ENST00000355500 CST3P01034 146 aaPredicted RBP8.37□□□□□ -1.07
COMMD9-202ENST00000355500 HEXBP07686 556 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 SRGAP2CP0DJJ0 459 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 CYP3A5P20815 502 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 NFKBIAP25963 317 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 KLRC2P26717 231 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 RPL34P49207 117 aaKnown RBP8.37□□□□□ -1.07
COMMD9-202ENST00000355500 RPIAP49247 311 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 RAD23BP54727 409 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 KRT17Q04695 432 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 ODF1Q14990 250 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 TMEM132DQ14C87 1099 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 XKR4Q5GH76 650 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 CEP78Q5JTW2 689 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 MFSD14CQ5VZR4 134 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 SLC30A9Q6PML9 568 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 LIMS2Q7Z4I7 341 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 CAND1Q86VP6 1230 aaKnown RBP8.37□□□□□ -1.07
COMMD9-202ENST00000355500 ERICH1Q86X53 443 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 C1orf127Q8N9H9 656 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 UBLCP1Q8WVY7 318 aaPredicted RBP8.37□□□□□ -1.07
COMMD9-202ENST00000355500 RIN2Q8WYP3 895 aaPredicted RBP8.37□□□□□ -1.07
COMMD9-202ENST00000355500 KCTD13Q8WZ19 329 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 BTBD6Q96KE9 485 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 TBATAQ96M53 351 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 SARGQ9BW04 601 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 ACP6Q9NPH0 428 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 NRCAMQ92823 1304 aa8.37□□□□□ -1.07
COMMD9-202ENST00000355500 CITO14578 2027 aa8.36□□□□□ -1.07
COMMD9-202ENST00000355500 F5H423 210 aaPredicted RBP8.36□□□□□ -1.07
COMMD9-202ENST00000355500 INO80B-WBP1J3KQ70 363 aa8.36□□□□□ -1.07
COMMD9-202ENST00000355500 LIASO43766 372 aa8.36□□□□□ -1.07
COMMD9-202ENST00000355500 LZTS3O60299 673 aaPredicted RBP8.36□□□□□ -1.07
COMMD9-202ENST00000355500 CYP2C8P10632 490 aa8.36□□□□□ -1.07
COMMD9-202ENST00000355500 PRKAR1BP31321 381 aa8.36□□□□□ -1.07
COMMD9-202ENST00000355500 GNGT1P63211 74 aa8.36□□□□□ -1.07
COMMD9-202ENST00000355500 PTPN11Q06124 597 aaPredicted RBP8.36□□□□□ -1.07
COMMD9-202ENST00000355500 NR1H3Q13133 447 aa8.36□□□□□ -1.07
COMMD9-202ENST00000355500 DSC3Q14574 896 aa8.36□□□□□ -1.07
COMMD9-202ENST00000355500 PPP2R5DQ14738 602 aa8.36□□□□□ -1.07
COMMD9-202ENST00000355500 TRADDQ15628 312 aa8.36□□□□□ -1.07
COMMD9-202ENST00000355500 SLC14A2Q15849 920 aa8.36□□□□□ -1.07
COMMD9-202ENST00000355500 GRIK4Q16099 956 aa8.36□□□□□ -1.07
COMMD9-202ENST00000355500 HADHQ16836 314 aaKnown RBP8.36□□□□□ -1.07
COMMD9-202ENST00000355500 LHX8Q68G74 356 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms