RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 IGFBP4P22692 258 aa18.42■□□□□ 0.54
COL18A1-202ENST00000355480 ATAD3BQ5T9A4 648 aa18.42■□□□□ 0.54
COL18A1-202ENST00000355480 CDKAL1Q5VV42 579 aa18.42■□□□□ 0.54
COL18A1-202ENST00000355480 TPGS1Q6ZTW0 290 aa18.42■□□□□ 0.54
COL18A1-202ENST00000355480 LUZP2Q86TE4 346 aa18.42■□□□□ 0.54
COL18A1-202ENST00000355480 TRPC4APQ8TEL6 797 aa18.42■□□□□ 0.54
COL18A1-202ENST00000355480 ANKRD7Q92527 254 aa18.42■□□□□ 0.54
COL18A1-202ENST00000355480 CATSPER2Q96P56 530 aa18.42■□□□□ 0.54
COL18A1-202ENST00000355480 SENP6Q9GZR1 1112 aaPredicted RBP18.42■□□□□ 0.54
COL18A1-202ENST00000355480 POPDC2Q9HBU9 364 aa18.42■□□□□ 0.54
COL18A1-202ENST00000355480 A1CFQ9NQ94 594 aaKnown RBP18.42■□□□□ 0.54
COL18A1-202ENST00000355480 CALB2P22676 271 aa18.42■□□□□ 0.54
COL18A1-202ENST00000355480 MAD2L1Q13257 205 aaPredicted RBP18.42■□□□□ 0.54
COL18A1-202ENST00000355480 MEGF6O75095 1541 aa18.42■□□□□ 0.54
COL18A1-202ENST00000355480 ACADSP16219 412 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 PSMC3P17980 439 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 GRK4P32298 578 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 PKN2Q16513 984 aaKnown RBP18.41■□□□□ 0.54
COL18A1-202ENST00000355480 NMRAL1Q9HBL8 299 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 ZW10O43264 779 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 RECQL4O94761 1208 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 RPN2P04844 631 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 SOX6P35712 828 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 SPANXN3Q5MJ09 141 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 WDR93Q6P2C0 686 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 NFKBIL1Q9UBC1 381 aaPredicted RBP18.41■□□□□ 0.54
COL18A1-202ENST00000355480 FAM153AQ9UHL3 310 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 NUDT5Q9UKK9 219 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 FRMPD4Q14CM0 1322 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 ZNF544Q6NX49 715 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 PALB2Q86YC2 1186 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 FNDC5Q8NAU1 212 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 VCPIP1Q96JH7 1222 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 PNMA5Q96PV4 448 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 NOD2Q9HC29 1040 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 KCNQ5Q9NR82 932 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 LTFP02788 710 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 CRABP2P29373 138 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 CRYMQ14894 314 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 SETMARQ53H47 684 aaPredicted RBP18.41■□□□□ 0.54
COL18A1-202ENST00000355480 ARMC12Q5T9G4 340 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 USP50Q70EL3 339 aaPredicted RBP18.41■□□□□ 0.54
COL18A1-202ENST00000355480 MID1IP1Q9NPA3 183 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 COMMD8Q9NX08 183 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 GAKO14976 1311 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 TYMPP19971 482 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 PTENP60484 403 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 DACT2Q5SW24 774 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 CES3Q6UWW8 571 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 GPR141Q7Z602 305 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 TMEM86AQ8N2M4 240 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 CAMKK1Q8N5S9 505 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 MYCBPAPQ8TBZ2 947 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 SUSD6Q92537 303 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 ROGDIQ9GZN7 287 aa18.41■□□□□ 0.54
COL18A1-202ENST00000355480 ZMYM2Q9UBW7 1377 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 LMTK2Q8IWU2 1503 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 FAM220BPB1ANY3 271 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 ATP5BP06576 529 aaKnown RBP18.4■□□□□ 0.54
COL18A1-202ENST00000355480 MRPS35P82673 323 aaKnown RBP18.4■□□□□ 0.54
COL18A1-202ENST00000355480 CCDC153Q494R4 210 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 FIG4Q92562 907 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 SENP8Q96LD8 212 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 ADAMTS13Q76LX8 1427 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 SEC22BO75396 215 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 NQO1P15559 274 aaKnown RBP18.4■□□□□ 0.54
COL18A1-202ENST00000355480 SLC1A6P48664 564 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 POLR2LP62875 67 aaKnown RBP18.4■□□□□ 0.54
COL18A1-202ENST00000355480 TMEM119Q4V9L6 283 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 RIPOR1Q6ZS17 1223 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 CYP4Z2PQ8N1L4 340 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 SPPL2AQ8TCT8 520 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 RSPH1Q8WYR4 309 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 IDI2Q9BXS1 227 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 ULBP1Q9BZM6 244 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 NAALADL1Q9UQQ1 740 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 PCDHA3Q9Y5H8 950 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 SARSP49591 514 aaKnown RBP18.4■□□□□ 0.54
COL18A1-202ENST00000355480 VGLL4Q14135 290 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 FBXL19Q6PCT2 694 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 GLMNQ92990 594 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 PANX3Q96QZ0 392 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 APBA2Q99767 749 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 TCF7L2Q9NQB0 619 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 E5RJQ4 531 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 APOBEC3HQ6NTF7 200 aaKnown RBP18.4■□□□□ 0.54
COL18A1-202ENST00000355480 SPACA7Q96KW9 195 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 CPNE1Q99829 537 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 C1QTNF7Q9BXJ2 289 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 ZDHHC6Q9H6R6 413 aa18.4■□□□□ 0.54
COL18A1-202ENST00000355480 SMNDC1O75940 238 aaKnown RBP eCLIP18.39■□□□□ 0.541e-6■■■□□ 18.2
COL18A1-202ENST00000355480 NOS3P29474 1203 aa18.39■□□□□ 0.54
COL18A1-202ENST00000355480 MMP13P45452 471 aa18.39■□□□□ 0.54
COL18A1-202ENST00000355480 XRCC4Q13426 336 aa18.39■□□□□ 0.54
COL18A1-202ENST00000355480 MILR1Q7Z6M3 343 aa18.39■□□□□ 0.54
COL18A1-202ENST00000355480 MRPL17Q9NRX2 175 aaKnown RBP18.39■□□□□ 0.54
COL18A1-202ENST00000355480 FRMPD1Q5SYB0 1578 aa18.39■□□□□ 0.54
COL18A1-202ENST00000355480 DNALI1O14645 258 aaPredicted RBP18.39■□□□□ 0.53
COL18A1-202ENST00000355480 EIF2S1P05198 315 aaKnown RBP18.39■□□□□ 0.53
COL18A1-202ENST00000355480 NUP107P57740 925 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms