RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PPP1R13LQ8WUF5 828 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 FAF2Q96CS3 445 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 SPATA33Q96N06 139 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 ACAP3Q96P50 834 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 MECRQ9BV79 373 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 CEP44Q9C0F1 390 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 TIMMDC1Q9NPL8 285 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 RAB6BQ9NRW1 208 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 NDUFA13Q9P0J0 144 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 RPL26L1Q9UNX3 145 aaKnown RBP9.64□□□□□ -0.87
SMG6-202ENST00000354901 PRELID1Q9Y255 219 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 SPO11Q9Y5K1 396 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 PRR5-ARHGAP8B1AHC4 643 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 GPR25O00155 361 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 PRPF4O43172 522 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMG6-202ENST00000354901 LPXNO60711 386 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 HNRNPCL1O60812 293 aaKnown RBP9.64□□□□□ -0.87
SMG6-202ENST00000354901 MICAL2O94851 1124 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 ARHGAP8P85298 464 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 PTPN11Q06124 597 aaPredicted RBP9.64□□□□□ -0.87
SMG6-202ENST00000354901 ITGA9Q13797 1035 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 EFHC2Q5JST6 749 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 EFHC1Q5JVL4 640 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 IER5Q5VY09 327 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 EFCAB12Q6NXP0 572 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 MPZL3Q6UWV2 235 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 XKR5Q6UX68 686 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 BBS12Q6ZW61 710 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 XYLT1Q86Y38 959 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 C12orf29Q8N999 325 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 NAT8LQ8N9F0 302 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 SREK1Q8WXA9 508 aaKnown RBP9.64□□□□□ -0.87
SMG6-202ENST00000354901 THAP11Q96EK4 314 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 PEBP4Q96S96 227 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 ELOVL4Q9GZR5 314 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 CDT1Q9H211 546 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 S100A14Q9HCY8 104 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 SACM1LQ9NTJ5 587 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 SIX4Q9UIU6 781 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 DMTF1Q9Y222 760 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 FARP1Q9Y4F1 1045 aaPredicted RBP9.64□□□□□ -0.87
SMG6-202ENST00000354901 SNCAIPQ9Y6H5 919 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 PARP14Q460N5 1801 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 LACTBL1A8MY62 500 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 K7EPI3 171 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 INHBAP08476 426 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 IQCF3P0C7M6 154 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 MYCLP1P12525 358 aaPredicted RBP9.63□□□□□ -0.87
SMG6-202ENST00000354901 PDGFRAP16234 1089 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 NR4A1P22736 598 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 ACTR3P61158 418 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 DPYSL3Q14195 570 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 DCAF6Q58WW2 860 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 JADE1Q6IE81 842 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 TMC7Q7Z402 723 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 IQCF2Q8IXL9 164 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 NETO2Q8NC67 525 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 GPATCH1Q9BRR8 931 aaKnown RBP9.63□□□□□ -0.87
SMG6-202ENST00000354901 OSBPL10Q9BXB5 764 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 SLC13A1Q9BZW2 595 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 IFT122Q9HBG6 1241 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 SENP1Q9P0U3 644 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 SLC24A2Q9UI40 661 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 CROTQ9UKG9 612 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 NR2E3Q9Y5X4 410 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 KCNN4O15554 427 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 ZBTB11O95625 1053 aaPredicted RBP9.63□□□□□ -0.87
SMG6-202ENST00000354901 ICAM3P32942 547 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 TAP1Q03518 808 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 ENPEPQ07075 957 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 BMPR2Q13873 1038 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 VGLL4Q14135 290 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 METTL7BQ6UX53 244 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 DENND5BQ6ZUT9 1274 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 RSPH3Q86UC2 560 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 TDRPQ86YL5 185 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 CLVS1Q8IUQ0 354 aaPredicted RBP9.63□□□□□ -0.87
SMG6-202ENST00000354901 RNF148Q8N7C7 305 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 SLC4A11Q8NBS3 891 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 DNERQ8NFT8 737 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 NLGN2Q8NFZ4 835 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 FAM172AQ8WUF8 416 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 OTUD5Q96G74 571 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 SERAC1Q96JX3 654 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 ZNF518BQ9C0D4 1074 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 KLHL25Q9H0H3 589 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 ACSS3Q9H6R3 686 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 FAM49BQ9NUQ9 324 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 ATAD3AQ9NVI7 634 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 PHIPQ8WWQ0 1821 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 TCRBV9S1A1TA0A576 114 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 BUD23O43709 281 aaKnown RBP9.63□□□□□ -0.87
SMG6-202ENST00000354901 APRTP07741 180 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 AP3M2P53677 418 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 CDH15P55291 814 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 TMPRSS15P98073 1019 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 ROR1Q01973 937 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 NET1Q7Z628 596 aaPredicted RBP9.63□□□□□ -0.87
SMG6-202ENST00000354901 CHST13Q8NET6 341 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 PPP1R14CQ8TAE6 165 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms