RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 PCDH18Q9HCL0 1135 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 TADA2AO75478 443 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 GNA13Q14344 377 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 GPR107Q5VW38 600 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 BLOC1S5Q8TDH9 187 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 CELF4Q9BZC1 486 aaKnown RBP8.2□□□□□ -1.1
SCN8A-201ENST00000354534 RAD54BQ9Y620 910 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 GSAPA4D1B5 854 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 MNDAP41218 407 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 MAGEA8P43361 318 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 PPP1R18Q6NYC8 613 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 THRSPQ92748 146 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 PHB2Q99623 299 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 KCNS3Q9BQ31 491 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 KLF15Q9UIH9 416 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 SH2B2O14492 632 aaPredicted RBP8.2□□□□□ -1.1
SCN8A-201ENST00000354534 PMPCBO75439 489 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 SLC25A12O75746 678 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 TUBA1BP68363 451 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 ALG11Q2TAA5 492 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 HSDL1Q3SXM5 330 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 INO80DQ53TQ3 878 aaPredicted RBP8.2□□□□□ -1.1
SCN8A-201ENST00000354534 HLA-DQA1Q5Y7H0 255 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 IRGCQ6NXR0 463 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 FAM117BQ6P1L5 589 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 CYP2R1Q6VVX0 501 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 TUBA1AQ71U36 451 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 CHERPQ8IWX8 916 aaKnown RBP8.2□□□□□ -1.1
SCN8A-201ENST00000354534 ZHX1-C8orf76Q96EF9 292 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 ERMAPQ96PL5 475 aaPredicted RBP8.2□□□□□ -1.1
SCN8A-201ENST00000354534 WRNIP1Q96S55 665 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 ADPRHL2Q9NX46 363 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 DNAJC16Q9Y2G8 782 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 O00370 1275 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 TP73O15350 636 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 P4HBP07237 508 aaKnown RBP8.2□□□□□ -1.1
SCN8A-201ENST00000354534 SLC34A1Q06495 639 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 RIPK1Q13546 671 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 KCNB1Q14721 858 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 CARTPTQ16568 116 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 CA9Q16790 459 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 DHFR2Q86XF0 187 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 ITFG1Q8TB96 612 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 SKA1Q96BD8 255 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 PLGRKTQ9HBL7 147 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 NKIRAS2Q9NYR9 191 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 SHOC2Q9UQ13 582 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 PRRG1O14668 218 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 SCAMP1O15126 338 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 PLA2G6O60733 806 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 LIFRP42702 1097 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 ATP2C1P98194 919 aaPredicted RBP8.2□□□□□ -1.1
SCN8A-201ENST00000354534 FNBP1LQ5T0N5 605 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 LINC00523Q86TU6 105 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 REEP1Q9H902 201 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 LGR6Q9HBX8 967 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 GPR108Q9NPR9 543 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 ARHGAP28Q9P2N2 729 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 INVSQ9Y283 1065 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 FAM240BA0A1B0GVZ2 78 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 GLRA3O75311 464 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 GCP02774 474 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 PTGER2P43116 358 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 ACAP2Q15057 778 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 ZFP1Q6P2D0 407 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 C4orf22Q6V702 233 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 STOX1Q6ZVD7 989 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 ERO1BQ86YB8 467 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 CBWD2Q8IUF1 395 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 SPERTQ8NA61 448 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 SLC7A14Q8TBB6 771 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 DPF3Q92784 378 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 DHRS1Q96LJ7 313 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 AIFM3Q96NN9 605 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 MED15Q96RN5 788 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 FRMD8Q9BZ67 464 aaPredicted RBP8.2□□□□□ -1.1
SCN8A-201ENST00000354534 IKZF3Q9UKT9 509 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 VPS9D1Q9Y2B5 631 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 SQLEQ14534 574 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 DCAF6Q58WW2 860 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 SRFBP1Q8NEF9 429 aaKnown RBP8.2□□□□□ -1.1
SCN8A-201ENST00000354534 FLAD1Q8NFF5 587 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 ERLEC1Q96DZ1 483 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 DPY30Q9C005 99 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 STAP2Q9UGK3 403 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 VPS4AQ9UN37 437 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 C2orf74A8MZ97 194 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 TMEM114B3SHH9 223 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 FGFR1P11362 822 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 IFNAR1P17181 557 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 CAPGP40121 348 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 SV2CQ496J9 727 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 FNDC5Q8NAU1 212 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 KYQ8NBH2 561 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 CDADC1Q9BWV3 514 aa8.2□□□□□ -1.1
SCN8A-201ENST00000354534 PLEKHG1Q9ULL1 1385 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 RAD51CO43502 376 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 RSL1D1O76021 490 aaKnown RBP8.19□□□□□ -1.1
SCN8A-201ENST00000354534 PPM1AP35813 382 aa8.19□□□□□ -1.1
SCN8A-201ENST00000354534 TOP3AQ13472 1001 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms