RNA–Protein interactions for RNA: ENST00000354480.2

RBM3-201, Transcript of RNA binding motif protein 3, humanhuman

TSL 2 BASIC

Gene RBM3, Length 1,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-201ENST00000354480 TPSAB1Q15661 275 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 DNAJC21Q5F1R6 531 aaKnown RBP13.06□□□□□ -0.32
RBM3-201ENST00000354480 DDX53Q86TM3 631 aaKnown RBP13.06□□□□□ -0.32
RBM3-201ENST00000354480 GPR65Q8IYL9 337 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 SH2D3CQ8N5H7 860 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 TTC9BQ8N6N2 239 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 ATP6V0D2Q8N8Y2 350 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 ATP11CQ8NB49 1132 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 COLGALT1Q8NBJ5 622 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 CCDC110Q8TBZ0 833 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 TLCD1Q96CP7 247 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 TTLL2Q9BWV7 592 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 UBE2OQ9C0C9 1292 aaKnown RBP13.06□□□□□ -0.32
RBM3-201ENST00000354480 ETNK1Q9HBU6 452 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.06□□□□□ -0.32
RBM3-201ENST00000354480 MFHAS1Q9Y4C4 1052 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 HTTP42858 3142 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 WDR27A2RRH5 827 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 VNN2O95498 520 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
RBM3-201ENST00000354480 DEFB103AP81534 67 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 CREMQ03060 361 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 TRIP4Q15650 581 aaPredicted RBP13.06□□□□□ -0.32
RBM3-201ENST00000354480 ANKRD20A2Q5SQ80 823 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 ANKRD20A1Q5TYW2 823 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 ANKRD20A3Q5VUR7 823 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 RWDD4Q6NW29 188 aaKnown RBP13.06□□□□□ -0.32
RBM3-201ENST00000354480 PALM2Q8IXS6 379 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 RIBC1Q8N443 379 aaPredicted RBP13.06□□□□□ -0.32
RBM3-201ENST00000354480 ZNF276Q8N554 614 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 TAB3Q8N5C8 712 aaPredicted RBP13.06□□□□□ -0.32
RBM3-201ENST00000354480 P2RY11Q96G91 374 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 SLC39A13Q96H72 371 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 FCRL2Q96LA5 508 aaPredicted RBP13.06□□□□□ -0.32
RBM3-201ENST00000354480 LGMNQ99538 433 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 SIK2Q9H0K1 926 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 PRDM12Q9H4Q4 367 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 VPS37BQ9H9H4 285 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 RC3H2Q9HBD1 1191 aaKnown RBP13.06□□□□□ -0.32
RBM3-201ENST00000354480 OSER1Q9NX31 292 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 FNIP2Q9P278 1114 aa13.06□□□□□ -0.32
RBM3-201ENST00000354480 ZMYND8Q9ULU4 1186 aaPredicted RBP13.06□□□□□ -0.32
RBM3-201ENST00000354480 DNAH12Q6ZR08 3092 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 RNF103O00237 685 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 MSI1O43347 362 aaKnown RBP13.05□□□□□ -0.32
RBM3-201ENST00000354480 SPAG6O75602 509 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 TMEM63AO94886 807 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 URODP06132 367 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 ZDHHC11BP0C7U3 371 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 SRGAP2BP0DMP2 458 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 HOXC13P31276 330 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 LMAN1P49257 510 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 PGFP49763 221 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 MLLT6P55198 1093 aaPredicted RBP13.05□□□□□ -0.32
RBM3-201ENST00000354480 PPIDQ08752 370 aaKnown RBP13.05□□□□□ -0.32
RBM3-201ENST00000354480 GALNT2Q10471 571 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 PPIGQ13427 754 aaKnown RBP eCLIP13.05□□□□□ -0.325e-10■■■■□ 23.6
RBM3-201ENST00000354480 SEMA5AQ13591 1074 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 PARP6Q2NL67 630 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 BBS9Q3SYG4 887 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 CCDC38Q502W7 563 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 FNBP1LQ5T0N5 605 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 FAM117BQ6P1L5 589 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 LRRC31Q6UY01 552 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 TAOK1Q7L7X3 1001 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 ZNF461Q8TAF7 563 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 GPR152Q8TDT2 470 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 HDAC11Q96DB2 347 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 LRRC39Q96DD0 335 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 YME1L1Q96TA2 773 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 VAT1Q99536 393 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 VN1R3Q9BXE9 311 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 CNOT10Q9H9A5 744 aaKnown RBP13.05□□□□□ -0.32
RBM3-201ENST00000354480 XAB2Q9HCS7 855 aaKnown RBP13.05□□□□□ -0.32
RBM3-201ENST00000354480 TRHDEQ9UKU6 1024 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 SSX2IPQ9Y2D8 614 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 MRPL42Q9Y6G3 142 aaKnown RBP13.05□□□□□ -0.32
RBM3-201ENST00000354480 FNDC1Q4ZHG4 1894 aaPredicted RBP13.05□□□□□ -0.32
RBM3-201ENST00000354480 MICAL3Q7RTP6 2002 aa13.05□□□□□ -0.32
RBM3-201ENST00000354480 TCRBV7S3A2A0A539 114 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 SOAT2O75908 522 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 ABLIM3O94929 683 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 APRTP07741 180 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 CSH1P0DML2 217 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 CSH2P0DML3 217 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 VAV1P15498 845 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 ITGB8P26012 769 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 ALDH1A3P47895 512 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 MAGOHP61326 146 aaKnown RBP13.04□□□□□ -0.32
RBM3-201ENST00000354480 PPP2R2AP63151 447 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 RING1Q06587 406 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 EFEMP1Q12805 493 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 AUHQ13825 339 aaKnown RBP13.04□□□□□ -0.32
RBM3-201ENST00000354480 C10orf120Q5SQS8 335 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 MANEALQ5VSG8 457 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 LRRC49Q8IUZ0 686 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 EPS8L3Q8TE67 593 aaKnown RBP13.04□□□□□ -0.32
RBM3-201ENST00000354480 GIPC2Q8TF65 315 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 CLSTN3Q9BQT9 956 aa13.04□□□□□ -0.32
RBM3-201ENST00000354480 CAPS2Q9BXY5 557 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms