RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 DERAQ9Y315 318 aa12.47□□□□□ -0.41
DDX4-201ENST00000353507 ZNF638Q14966 1978 aaKnown RBP12.46□□□□□ -0.41
DDX4-201ENST00000353507 HCRTO43612 131 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 GSRP00390 522 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 MX2P20592 715 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 PSMB4P28070 264 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 SCNN1AP37088 669 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 ACADSBP45954 432 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 EFHC1Q5JVL4 640 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 STRADAQ7RTN6 431 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 RSPH3Q86UC2 560 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 NME8Q8N427 588 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 LRRC52Q8N7C0 313 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 GSTCDQ8NEC7 633 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 ZMAT2Q96NC0 199 aaKnown RBP12.46□□□□□ -0.41
DDX4-201ENST00000353507 CXCL16Q9H2A7 254 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 MROH8Q9H579 483 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 PLEKHA5Q9HAU0 1116 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 SYBUQ9NX95 663 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 PSAT1Q9Y617 370 aa12.46□□□□□ -0.41
DDX4-201ENST00000353507 SYNJ2BP-COX16A0A087WUM0 186 aa12.46□□□□□ -0.42
DDX4-201ENST00000353507 SIN3BO75182 1162 aa12.46□□□□□ -0.42
DDX4-201ENST00000353507 USP1O94782 785 aa12.46□□□□□ -0.42
DDX4-201ENST00000353507 POLBP06746 335 aa12.46□□□□□ -0.42
DDX4-201ENST00000353507 EPHB1P54762 984 aa12.46□□□□□ -0.42
DDX4-201ENST00000353507 IFRD2Q12894 506 aaPredicted RBP12.46□□□□□ -0.42
DDX4-201ENST00000353507 TUBB3Q13509 450 aa12.46□□□□□ -0.42
DDX4-201ENST00000353507 ERO1BQ86YB8 467 aa12.46□□□□□ -0.42
DDX4-201ENST00000353507 NETO2Q8NC67 525 aa12.46□□□□□ -0.42
DDX4-201ENST00000353507 ZNF483Q8TF39 744 aaPredicted RBP12.46□□□□□ -0.42
DDX4-201ENST00000353507 C18orf25Q96B23 403 aaPredicted RBP12.46□□□□□ -0.42
DDX4-201ENST00000353507 P2RY11Q96G91 374 aa12.46□□□□□ -0.42
DDX4-201ENST00000353507 SNX27Q96L92 541 aa12.46□□□□□ -0.42
DDX4-201ENST00000353507 DNAI2Q9GZS0 605 aa12.46□□□□□ -0.42
DDX4-201ENST00000353507 COX16Q9P0S2 106 aa12.46□□□□□ -0.42
DDX4-201ENST00000353507 RCOR3Q9P2K3 495 aaPredicted RBP12.46□□□□□ -0.42
DDX4-201ENST00000353507 ADM5C9JUS6 153 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 AHCYL1O43865 530 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 PROCP04070 461 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 UBTFL6P0CB48 400 aaPredicted RBP12.45□□□□□ -0.42
DDX4-201ENST00000353507 RALBP11234 206 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 CPOXP36551 454 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 GP5P40197 560 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 PDK1Q15118 436 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 INSCQ1MX18 579 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 RABGAP1LQ5R372 815 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 TMCO4Q5TGY1 634 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 RNF220Q5VTB9 566 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 PDPK2PQ6A1A2 396 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 SULF1Q8IWU6 871 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 SPDYE1Q8NFV5 336 aaPredicted RBP12.45□□□□□ -0.42
DDX4-201ENST00000353507 ECSITQ9BQ95 431 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 SNX25Q9H3E2 840 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 PNPOQ9NVS9 261 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 DNAJC28Q9NX36 388 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 IL1RAPL1Q9NZN1 696 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 COPG2Q9UBF2 871 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 GTF2IRD1Q9UHL9 959 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 PPM1HQ9ULR3 514 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 FZD10Q9ULW2 581 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 USP3Q9Y6I4 520 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 RPS6KL1Q9Y6S9 549 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 A0A088AWK7 358 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 E2F8A0AVK6 867 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 CXCL11O14625 94 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 CREB3O43889 395 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 FESP07332 822 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 ERVK-10P10266 1014 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 NCF2P19878 526 aaPredicted RBP12.45□□□□□ -0.42
DDX4-201ENST00000353507 MATKP42679 507 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 KIZQ2M2Z5 673 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 CFAP157Q5JU67 520 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 OR52E8Q6IFG1 317 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 CES3Q6UWW8 571 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 CATSPER4Q7RTX7 472 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 ZNF410Q86VK4 478 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 DEFB106AQ8N104 65 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 GPC2Q8N158 579 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 PPTC7Q8NI37 304 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 SLC2A14Q8TDB8 520 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 RNF139Q8WU17 664 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 ARNTL2Q8WYA1 636 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 CERS2Q96G23 380 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 NR1H4Q96RI1 486 aaPredicted RBP12.45□□□□□ -0.42
DDX4-201ENST00000353507 CYP4F11Q9HBI6 524 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 TMEM216Q9P0N5 145 aa12.45□□□□□ -0.42
DDX4-201ENST00000353507 H3BRB1 525 aa12.44□□□□□ -0.42
DDX4-201ENST00000353507 MYL4P12829 197 aa12.44□□□□□ -0.42
DDX4-201ENST00000353507 GNL1P36915 607 aaPredicted RBP12.44□□□□□ -0.42
DDX4-201ENST00000353507 MLH1P40692 756 aa12.44□□□□□ -0.42
DDX4-201ENST00000353507 IDH3AP50213 366 aa12.44□□□□□ -0.42
DDX4-201ENST00000353507 ABCE1P61221 599 aaKnown RBP12.44□□□□□ -0.42
DDX4-201ENST00000353507 ITGA9Q13797 1035 aa12.44□□□□□ -0.42
DDX4-201ENST00000353507 GRIK4Q16099 956 aa12.44□□□□□ -0.42
DDX4-201ENST00000353507 PPM1JQ5JR12 505 aa12.44□□□□□ -0.42
DDX4-201ENST00000353507 FBXO47Q5MNV8 452 aa12.44□□□□□ -0.42
DDX4-201ENST00000353507 C9orf57Q5W0N0 161 aa12.44□□□□□ -0.42
DDX4-201ENST00000353507 SLC27A1Q6PCB7 646 aa12.44□□□□□ -0.42
DDX4-201ENST00000353507 AAGABQ6PD74 315 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms