RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 ATP8B1O43520 1251 aa13.74□□□□□ -0.21
LMBR1-201ENST00000353442 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
LMBR1-201ENST00000353442 OTUD4Q01804 1114 aaKnown RBP13.74□□□□□ -0.21
LMBR1-201ENST00000353442 UAP1L1Q3KQV9 507 aa13.74□□□□□ -0.21
LMBR1-201ENST00000353442 FAM220AQ7Z4H9 259 aa13.74□□□□□ -0.21
LMBR1-201ENST00000353442 TDRD5Q8NAT2 981 aaKnown RBP13.74□□□□□ -0.21
LMBR1-201ENST00000353442 SPATA20Q8TB22 786 aa13.74□□□□□ -0.21
LMBR1-201ENST00000353442 CHP1Q99653 195 aa13.74□□□□□ -0.21
LMBR1-201ENST00000353442 USP20Q9Y2K6 914 aa13.74□□□□□ -0.21
LMBR1-201ENST00000353442 TARSP26639 723 aaKnown RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 GEMIN4P57678 1058 aaKnown RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 EXOSC10Q01780 885 aaKnown RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 OTUD3Q5T2D3 398 aaPredicted RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 RAP1GAP2Q684P5 730 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 STX12Q86Y82 276 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 GRIP2Q9C0E4 1043 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 INTS10Q9NVR2 710 aaKnown RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 TRIM24O15164 1050 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 TSPAN19P0C672 248 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 RPA3P35244 121 aaPredicted RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 C11orf63Q6NUN7 778 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 SYT12Q8IV01 421 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 CDK5RAP1Q96SZ6 601 aaKnown RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 TM6SF2Q9BZW4 377 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 AGPAT5Q9NUQ2 364 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 KANSL1LA0AUZ9 987 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 TBL1XO60907 577 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 NECTIN1Q15223 517 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 FSCN1Q16658 493 aaKnown RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 PSRC1Q6PGN9 363 aaPredicted RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 CRTC3Q6UUV7 619 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 MILR1Q7Z6M3 343 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 VPS33BQ9H267 617 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 H3BRB1 525 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 BUD23O43709 281 aaKnown RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 RENBPP51606 427 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 PDX1P52945 283 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 BNC1Q01954 994 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 STYK1Q6J9G0 422 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 DENND1CQ8IV53 801 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 FBXO36Q8NEA4 188 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 PROX1Q92786 737 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 RAD51AP1Q96B01 352 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 ASAH2Q9NR71 780 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 DNAJC11Q9NVH1 559 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 TOP3BO95985 862 aaKnown RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 PGK1P00558 417 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 NTRK1P04629 796 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 IGKV5-2P06315 115 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 MYL12AP19105 171 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 ABRQ12979 859 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 NAA30Q147X3 362 aaPredicted RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 PGBD2Q6P3X8 592 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 USP45Q70EL2 814 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 ZNF579Q8NAF0 562 aaKnown RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 GPR152Q8TDT2 470 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 SLC27A5Q9Y2P5 690 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 MRPS7Q9Y2R9 242 aaKnown RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 BTN3A1O00481 513 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 H2AFXP16104 143 aaPredicted RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 IGFALSP35858 605 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 AGKQ53H12 422 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 CDCA5Q96FF9 252 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 CLEC4MQ9H2X3 399 aaPredicted RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 ARIH1Q9Y4X5 557 aaPredicted RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 PLXNC1O60486 1568 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 DGKZQ13574 1117 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 OLFML2AQ68BL7 652 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 SLC30A9Q6PML9 568 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.73□□□□□ -0.21
LMBR1-201ENST00000353442 ZNF558Q96NG5 402 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 JMJD4Q9H9V9 463 aa13.73□□□□□ -0.21
LMBR1-201ENST00000353442 ATP7AQ04656 1500 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 TMEM114B3SHH9 223 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 VDRP11473 427 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 ARL3P36405 182 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 TMED10P49755 219 aaKnown RBP13.72□□□□□ -0.21
LMBR1-201ENST00000353442 COPAP53621 1224 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 FOXM1Q08050 763 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 PKN1Q16512 942 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 DEFB115Q30KQ5 88 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 COLEC12Q5KU26 742 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 DAW1Q8N136 415 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 ZCCHC17Q9NP64 241 aaKnown RBP13.72□□□□□ -0.21
LMBR1-201ENST00000353442 TCOF1Q13428 1488 aaKnown RBP13.72□□□□□ -0.21
LMBR1-201ENST00000353442 DNTTP04053 509 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 DBIP07108 87 aaKnown RBP13.72□□□□□ -0.21
LMBR1-201ENST00000353442 SERPINF2P08697 491 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 ADSLP30566 484 aaPredicted RBP13.72□□□□□ -0.21
LMBR1-201ENST00000353442 TTC7BQ86TV6 843 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 PRSS58Q8IYP2 241 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 ZNF232Q9UNY5 417 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 COX7A2P14406 83 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 CXCR2P25025 360 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 ARMC12Q5T9G4 340 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 MDM1Q8TC05 714 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 ARL15Q9NXU5 204 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 NYAP2Q9P242 653 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 TAF6LQ9Y6J9 622 aa13.72□□□□□ -0.21
LMBR1-201ENST00000353442 BCLAF3A2AJT9 711 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms