RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 LENG1Q96BZ8 264 aaPredicted RBP22.76■■□□□ 1.23
UPF3A-201ENST00000351487 CCDC195A0A1B0GUA6 201 aa22.75■■□□□ 1.23
UPF3A-201ENST00000351487 F5H423 210 aaPredicted RBP22.75■■□□□ 1.23
UPF3A-201ENST00000351487 EEF2KO00418 725 aaKnown RBP22.75■■□□□ 1.23
UPF3A-201ENST00000351487 GSC2O15499 205 aa22.75■■□□□ 1.23
UPF3A-201ENST00000351487 CREB3O43889 395 aa22.75■■□□□ 1.23
UPF3A-201ENST00000351487 GSRP00390 522 aa22.75■■□□□ 1.23
UPF3A-201ENST00000351487 SESN2P58004 480 aaPredicted RBP22.75■■□□□ 1.23
UPF3A-201ENST00000351487 SCAPQ12770 1279 aa22.75■■□□□ 1.23
UPF3A-201ENST00000351487 CRLF3Q8IUI8 442 aa22.75■■□□□ 1.23
UPF3A-201ENST00000351487 NME8Q8N427 588 aa22.75■■□□□ 1.23
UPF3A-201ENST00000351487 CFAP61Q8NHU2 1237 aa22.75■■□□□ 1.23
UPF3A-201ENST00000351487 ZNF570Q96NI8 536 aa22.75■■□□□ 1.23
UPF3A-201ENST00000351487 SYT17Q9BSW7 474 aa22.75■■□□□ 1.23
UPF3A-201ENST00000351487 MMADHCQ9H3L0 296 aaPredicted RBP22.75■■□□□ 1.23
UPF3A-201ENST00000351487 GEMIN8Q9NWZ8 242 aaKnown RBP22.75■■□□□ 1.23
UPF3A-201ENST00000351487 HBS1LQ9Y450 684 aaKnown RBP22.75■■□□□ 1.23
UPF3A-201ENST00000351487 RAD54BQ9Y620 910 aa22.75■■□□□ 1.23
UPF3A-201ENST00000351487 GYG2O15488 501 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 GLRA3O75311 464 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 FBXO21O94952 628 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 LMNAP02545 664 aaKnown RBP22.74■■□□□ 1.23
UPF3A-201ENST00000351487 FAM200BP0CF97 657 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 HOXC8P31273 242 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 CPT1AP50416 773 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 FKBP1BP68106 108 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 SEMA3BQ13214 749 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 KIAA0319Q5VV43 1072 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 ALYREFQ86V81 257 aaKnown RBP22.74■■□□□ 1.23
UPF3A-201ENST00000351487 SYNJ2BP-COX16A0A087WUM0 186 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.74■■□□□ 1.23
UPF3A-201ENST00000351487 CAPN14A8MX76 684 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 C9IYK1 514 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 FYNP06241 537 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 RARBP10826 455 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 ESRRAP11474 423 aaPredicted RBP22.74■■□□□ 1.23
UPF3A-201ENST00000351487 TKTL1P51854 596 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 GJA9P57773 515 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 MAP2K5Q13163 448 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 NME3Q13232 169 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 MDH1BQ5I0G3 518 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 SPRYD7Q5W111 196 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 HFE2Q6ZVN8 426 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 MAB21L3Q8N8X9 362 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 CCNYQ8ND76 341 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 XPNPEP3Q9NQH7 507 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 KRT82Q9NSB4 513 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 THAP1Q9NVV9 213 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 SYBUQ9NX95 663 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 TAS2R1Q9NYW7 299 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 COX16Q9P0S2 106 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 SLC17A6Q9P2U8 582 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 EMCNQ9ULC0 261 aa22.74■■□□□ 1.23
UPF3A-201ENST00000351487 ENTPD5O75356 428 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 TOP3BO95985 862 aaKnown RBP22.73■■□□□ 1.23
UPF3A-201ENST00000351487 ADRA1BP35368 520 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 STX3Q13277 289 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 TWF2Q6IBS0 349 aaKnown RBP22.73■■□□□ 1.23
UPF3A-201ENST00000351487 NETO2Q8NC67 525 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 RNF169Q8NCN4 708 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 PGBD4Q96DM1 585 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 SIKE1Q9BRV8 207 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 CEP41Q9BYV8 373 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 C20orf27Q9GZN8 174 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 CXorf56Q9H5V9 222 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 FLRT1Q9NZU1 646 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 SEPT10Q9P0V9 454 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 C17orf102A2RUQ5 167 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 TPP1O14773 563 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 RFWD3Q6PCD5 774 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 RINLQ6ZS11 566 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 TTC8Q8TAM2 541 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 MED10Q9BTT4 135 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 KATNAL1Q9BW62 490 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 DCLRE1BQ9H816 532 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 ZNF395Q9H8N7 513 aaPredicted RBP22.73■■□□□ 1.23
UPF3A-201ENST00000351487 WDR6Q9NNW5 1121 aaKnown RBP22.73■■□□□ 1.23
UPF3A-201ENST00000351487 CRTAC1Q9NQ79 661 aa22.73■■□□□ 1.23
UPF3A-201ENST00000351487 NRP1O14786 923 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 ITGA2BP08514 1039 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 MAP3K7CLP57077 242 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 DAOAP59103 153 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 IFRD2Q12894 506 aaPredicted RBP22.72■■□□□ 1.23
UPF3A-201ENST00000351487 PDE1CQ14123 709 aaPredicted RBP22.72■■□□□ 1.23
UPF3A-201ENST00000351487 PDZD4Q76G19 769 aaPredicted RBP22.72■■□□□ 1.23
UPF3A-201ENST00000351487 PGAP3Q96FM1 320 aaPredicted RBP22.72■■□□□ 1.23
UPF3A-201ENST00000351487 ZFP42Q96MM3 310 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 ULBP1Q9BZM6 244 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 CNGB3Q9NQW8 809 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 PIH1D1Q9NWS0 290 aaKnown RBP22.72■■□□□ 1.23
UPF3A-201ENST00000351487 DDX43Q9NXZ2 648 aaKnown RBP22.72■■□□□ 1.23
UPF3A-201ENST00000351487 DCDC2Q9UHG0 476 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 POLBP06746 335 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 MYL3P08590 195 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 HCAR3P49019 387 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 FASTKD1Q53R41 847 aaKnown RBP22.72■■□□□ 1.23
UPF3A-201ENST00000351487 SPANXN3Q5MJ09 141 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 MBLAC2Q68D91 279 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 SLC7A14Q8TBB6 771 aa22.72■■□□□ 1.23
UPF3A-201ENST00000351487 ATP2A3Q93084 1043 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms