RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ANLNQ9NQW6 1124 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 MAD1L1Q9Y6D9 718 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 CAPN7Q9Y6W3 813 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 ZNF638Q14966 1978 aaKnown RBP17.19■□□□□ 0.34
SAMM50-201ENST00000350028 FRMPD3Q5JV73 1810 aa17.19■□□□□ 0.34
SAMM50-201ENST00000350028 MTSS1O43312 755 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 KRT37O76014 449 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 SNRPAP09012 282 aaKnown RBP17.18■□□□□ 0.34
SAMM50-201ENST00000350028 ALADP13716 330 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 MX2P20592 715 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 YWHAHQ04917 246 aaPredicted RBP17.18■□□□□ 0.34
SAMM50-201ENST00000350028 IFRD2Q12894 506 aaPredicted RBP17.18■□□□□ 0.34
SAMM50-201ENST00000350028 ZKSCAN8Q15776 578 aaPredicted RBP17.18■□□□□ 0.34
SAMM50-201ENST00000350028 TRAF7Q6Q0C0 670 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 CTU1Q7Z7A3 348 aaKnown RBP17.18■□□□□ 0.34
SAMM50-201ENST00000350028 ZNF567Q8N184 647 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 URGCPQ8TCY9 931 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 PXYLP1Q8TE99 480 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 TMEM209Q96SK2 561 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 TKTL2Q9H0I9 626 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 OSBPL2Q9H1P3 480 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 PRKAG3Q9UGI9 489 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 STARD13Q9Y3M8 1113 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 NR2E3Q9Y5X4 410 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 PTPRDP23468 1912 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 SDR42E2A6NKP2 422 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 FAM159BA6NKW6 160 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 TMEM189-UBE2V1I3L0A0 370 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 I6L893 689 aaPredicted RBP17.18■□□□□ 0.34
SAMM50-201ENST00000350028 ITGB1P05556 798 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 GSTA1P08263 222 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 SERPINB6P35237 376 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 DSC1Q08554 894 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 NOMO2Q5JPE7 1267 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 STEAP4Q687X5 459 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 PID1Q7Z2X4 250 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 TAC4Q86UU9 113 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 PDCD7Q8N8D1 485 aaKnown RBP17.18■□□□□ 0.34
SAMM50-201ENST00000350028 SLC43A3Q8NBI5 491 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 CD99L2Q8TCZ2 262 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 RAET1EQ8TD07 263 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 TCP10LQ8TDR4 215 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 DQX1Q8TE96 717 aaKnown RBP17.18■□□□□ 0.34
SAMM50-201ENST00000350028 STAMBPL1Q96FJ0 436 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 NAT9Q9BTE0 207 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 SEPT10Q9P0V9 454 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 KANSL3Q9P2N6 904 aa17.18■□□□□ 0.34
SAMM50-201ENST00000350028 NLRC5Q86WI3 1866 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 DNM1LO00429 736 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 GRIA1P42261 906 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 SERPINB9P50453 376 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 PPIDQ08752 370 aaKnown RBP17.17■□□□□ 0.34
SAMM50-201ENST00000350028 SF3A3Q12874 501 aaKnown RBP eCLIP17.17■□□□□ 0.34
SAMM50-201ENST00000350028 SH2D5Q6ZV89 423 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 MPP5Q8N3R9 675 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 RNF34Q969K3 372 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 MTBPQ96DY7 904 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 APOPT1Q96IL0 206 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 TRPV6Q9H1D0 765 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 VPS11Q9H270 941 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 ABCC13Q9NSE7 274 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 TMEM51Q9NW97 253 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 OR12D3Q9UGF7 316 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 GRID1Q9ULK0 1009 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 PATJQ8NI35 1801 aa17.17■□□□□ 0.34
SAMM50-201ENST00000350028 CXorf49A8MYA2 514 aaPredicted RBP17.16■□□□□ 0.34
SAMM50-201ENST00000350028 TRIM49D1C9J1S8 452 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 GOLGA8RI6L899 631 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 LPXNO60711 386 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 KRT38O76015 456 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 DDHD2O94830 711 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 IGLV3-25P01717 112 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 PSMB4P28070 264 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 SCTRP47872 440 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 GALNT2Q10471 571 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 BRMS1LQ5PSV4 323 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 RNF43Q68DV7 783 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 CGB2Q6NT52 195 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 DCP1BQ8IZD4 617 aaKnown RBP17.16■□□□□ 0.34
SAMM50-201ENST00000350028 CNPY4Q8N129 248 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 ZNF75CPQ92670 426 aaPredicted RBP17.16■□□□□ 0.34
SAMM50-201ENST00000350028 HDAC11Q96DB2 347 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 SERAC1Q96JX3 654 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 KLF6Q99612 283 aaPredicted RBP17.16■□□□□ 0.34
SAMM50-201ENST00000350028 SMYD2Q9NRG4 433 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 HAUS2Q9NVX0 235 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 MOCS1Q9NZB8 636 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 KLHL14Q9P2G3 628 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 KLHL8Q9P2G9 620 aaPredicted RBP17.16■□□□□ 0.34
SAMM50-201ENST00000350028 TRHDEQ9UKU6 1024 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 PHTF1Q9UMS5 762 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 H0YHG0 523 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 EDF1O60869 148 aaKnown RBP17.16■□□□□ 0.34
SAMM50-201ENST00000350028 GNRH1P01148 92 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 AMHP03971 560 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 COL6A1P12109 1028 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 PTPN3P26045 913 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 GRIK1P39086 918 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 NEK3P51956 506 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 DNAJC3Q13217 504 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms