RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 IGFBP6P24592 240 aaPredicted RBP18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 CACNA2D1P54289 1103 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 USP4Q13107 963 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 MARCH8Q5T0T0 291 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 MAMDC4Q6UXC1 1216 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 WDR75Q8IWA0 830 aaKnown RBP18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 DEFB106AQ8N104 65 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 SLC2A14Q8TDB8 520 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 GATA6Q92908 595 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 MPHOSPH6Q99547 160 aaKnown RBP18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 PACSIN3Q9UKS6 424 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 SIN3BO75182 1162 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 ALDH1A2O94788 518 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 CYP2C8P10632 490 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 PTPN9P43378 593 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 NDUFV1P49821 464 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 IDH3AP50213 366 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 ITGA9Q13797 1035 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 LBRQ14739 615 aaKnown RBP18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 TAPT1Q6NXT6 567 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 KYAT3Q6YP21 454 aaKnown RBP18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 ARCQ7LC44 396 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 IFNLR1Q8IU57 520 aaPredicted RBP18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 PHTF2Q8N3S3 785 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 PGBD4Q96DM1 585 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 C16orf70Q9BSU1 422 aa18.6■□□□□ 0.57
PTP4A3-202ENST00000349124 F8W8V4 182 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 DDNO94850 711 aaPredicted RBP18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 PROCP04070 461 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 NR2C2P49116 596 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 POU5F1BQ06416 359 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 DLG2Q15700 870 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 SLC26A9Q7LBE3 791 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 NME8Q8N427 588 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 OLFM3Q96PB7 478 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 PAPPA2Q9BXP8 1791 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 CLDN5O00501 218 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 AOC1P19801 751 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 NCF2P19878 526 aaPredicted RBP18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 TKTP29401 623 aaKnown RBP18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 TYK2P29597 1187 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 TRMT5Q32P41 509 aaKnown RBP18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 DCAF6Q58WW2 860 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 STEAP4Q687X5 459 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 RAPH1Q70E73 1250 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 MARK2Q7KZI7 788 aaKnown RBP18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 SULF1Q8IWU6 871 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 KBTBD7Q8WVZ9 684 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 AGAP2Q99490 1192 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 NXF3Q9H4D5 531 aaKnown RBP18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 PRDM12Q9H4Q4 367 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 CAB39LQ9H9S4 337 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 SOX13Q9UN79 622 aa18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 APOBEC2Q9Y235 224 aaKnown RBP18.59■□□□□ 0.57
PTP4A3-202ENST00000349124 H3BRB1 525 aa18.58■□□□□ 0.57
PTP4A3-202ENST00000349124 BEST1O76090 585 aa18.58■□□□□ 0.57
PTP4A3-202ENST00000349124 STAU1O95793 577 aaKnown RBP18.58■□□□□ 0.57
PTP4A3-202ENST00000349124 GRM5P41594 1212 aa18.58■□□□□ 0.57
PTP4A3-202ENST00000349124 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.58■□□□□ 0.57
PTP4A3-202ENST00000349124 ANKRD52Q8NB46 1076 aa18.58■□□□□ 0.57
PTP4A3-202ENST00000349124 OR52K1Q8NGK4 314 aa18.58■□□□□ 0.57
PTP4A3-202ENST00000349124 TUT1Q9H6E5 874 aaKnown RBP18.58■□□□□ 0.57
PTP4A3-202ENST00000349124 SETD4Q9NVD3 440 aa18.58■□□□□ 0.57
PTP4A3-202ENST00000349124 SCOCQ9UIL1 159 aa18.58■□□□□ 0.57
PTP4A3-202ENST00000349124 AMHP03971 560 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 GNL1P36915 607 aaPredicted RBP18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 NME3Q13232 169 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 DNAL1Q4LDG9 190 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 LRRC8BQ6P9F7 803 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 ZNF567Q8N184 647 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 ACVR1CQ8NER5 493 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 ADAM32Q8TC27 787 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.58■□□□□ 0.563e-8■■■□□ 18.7
PTP4A3-202ENST00000349124 PPP2R3BQ9Y5P8 575 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 RPS6KL1Q9Y6S9 549 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 ZNF195O14628 629 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 GNAT1P11488 350 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 ZFXP17010 805 aaPredicted RBP18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 ARL4AP40617 200 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 SYPL2Q5VXT5 272 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 LPCAT4Q643R3 524 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 NAPRTQ6XQN6 538 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 APBB2Q92870 758 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 PPP1R36Q96LQ0 422 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 TSC22D3Q99576 134 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 NDE1Q9NXR1 346 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 ANGPTL2Q9UKU9 493 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 FZD10Q9ULW2 581 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 ASB3Q9Y575 518 aa18.58■□□□□ 0.56
PTP4A3-202ENST00000349124 CCDC78A2IDD5 438 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 FAM72CH0Y354 149 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 GOLGA8TH3BQL2 631 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 SULT1E1P49888 294 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 SARNPP82979 210 aaKnown RBP18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 BST2Q10589 180 aaKnown RBP18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 ZBTB6Q15916 424 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 FAM72AQ5TYM5 149 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 C9orf57Q5W0N0 161 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 FAM72DQ6L9T8 149 aa18.57■□□□□ 0.56
PTP4A3-202ENST00000349124 PID1Q7Z2X4 250 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms