RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 CFAP69A5D8W1 941 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 DRGXA6NNA5 263 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 WASH4PA8MWX3 477 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 HACD1B0YJ81 288 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 H7C0C1 242 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 SGK1O00141 431 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 DNALI1O14645 258 aaPredicted RBP11.33□□□□□ -0.6
ECM1-201ENST00000346569 COCHO43405 550 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 OAS1P00973 400 aaKnown RBP11.33□□□□□ -0.6
ECM1-201ENST00000346569 RBL1P28749 1068 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 BMP8BP34820 402 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 ADCY8P40145 1251 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 ATP5OP48047 213 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 CLCN4P51793 760 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 PLD1Q13393 1074 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 CASP8Q14790 479 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 TAF12Q16514 161 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 PABPC1LQ4VXU2 614 aaKnown RBP11.33□□□□□ -0.6
ECM1-201ENST00000346569 SLC45A4Q5BKX6 768 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 MS4A13Q5J8X5 152 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 ACBD5Q5T8D3 534 aaPredicted RBP11.33□□□□□ -0.6
ECM1-201ENST00000346569 PIK3R6Q5UE93 754 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 PLPP4Q5VZY2 271 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 HIBCHQ6NVY1 386 aaPredicted RBP11.33□□□□□ -0.6
ECM1-201ENST00000346569 CCDC149Q6ZUS6 474 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 B4GALNT4Q76KP1 1039 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 TADA2BQ86TJ2 420 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 ITIH5Q86UX2 942 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 ATP6V0D2Q8N8Y2 350 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 FAM71DQ8N9W8 422 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 RSAD2Q8WXG1 361 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 AZIN2Q96A70 460 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 SNF8Q96H20 258 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 TGS1Q96RS0 853 aaKnown RBP11.33□□□□□ -0.6
ECM1-201ENST00000346569 PRMT1Q99873 361 aaKnown RBP11.33□□□□□ -0.6
ECM1-201ENST00000346569 RNF38Q9H0F5 515 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 ENTPD7Q9NQZ7 604 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 SLC12A6Q9UHW9 1150 aa11.33□□□□□ -0.6
ECM1-201ENST00000346569 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.32□□□□□ -0.6
ECM1-201ENST00000346569 IGLV3-10A0A075B6K4 115 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 C5orf60A6NFR6 353 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 E9PAM4 449 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 H3BNC9 293 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 MFSD11O43934 449 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 GCATO75600 419 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 MAP3K6O95382 1288 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 IFNB1P01574 187 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 CA3P07451 260 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 SRGAP2BP0DMP2 458 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 EPHB2P29323 1055 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 IRS1P35568 1242 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 GGCXP38435 758 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 HSPA9P38646 679 aaKnown RBP11.32□□□□□ -0.6
ECM1-201ENST00000346569 ITGA8P53708 1063 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 COG7P83436 770 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 CAV1Q03135 178 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 MTA1Q13330 715 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 PDE12Q6L8Q7 609 aaKnown RBP11.32□□□□□ -0.6
ECM1-201ENST00000346569 GAREM2Q75VX8 874 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 PDZD4Q76G19 769 aaPredicted RBP11.32□□□□□ -0.6
ECM1-201ENST00000346569 MIB1Q86YT6 1006 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 TMC8Q8IU68 726 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 TP53INP2Q8IXH6 220 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 IQCKQ8N0W5 287 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 TSEN2Q8NCE0 465 aaKnown RBP11.32□□□□□ -0.6
ECM1-201ENST00000346569 BBOF1Q8ND07 529 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 LRRC45Q96CN5 670 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 GDAP1L1Q96MZ0 367 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 QKIQ96PU8 341 aaKnown RBP eCLIP11.32□□□□□ -0.6
ECM1-201ENST00000346569 FMO2Q99518 471 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 KLF16Q9BXK1 252 aaPredicted RBP11.32□□□□□ -0.6
ECM1-201ENST00000346569 PRDM12Q9H4Q4 367 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 VIPAS39Q9H9C1 493 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 PPARGC1AQ9UBK2 798 aaKnown RBP11.32□□□□□ -0.6
ECM1-201ENST00000346569 ANAPC5Q9UJX4 755 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 YBX2Q9Y2T7 364 aaKnown RBP11.32□□□□□ -0.6
ECM1-201ENST00000346569 UNC80Q8N2C7 3258 aa11.32□□□□□ -0.6
ECM1-201ENST00000346569 MYO16Q9Y6X6 1858 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 C2orf78A6NCI8 922 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 NCAM2O15394 837 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 PPFIA2O75334 1257 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 MOCS2O96007 188 aaPredicted RBP11.31□□□□□ -0.6
ECM1-201ENST00000346569 GLUD1P00367 558 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 APOEP02649 317 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 C8AP07357 584 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 HOXD11P31277 338 aaPredicted RBP11.31□□□□□ -0.6
ECM1-201ENST00000346569 CA8P35219 290 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 VPS41P49754 854 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 KCNQ1P51787 676 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 NRLP54845 237 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 GPS1Q13098 491 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 CALCOCO2Q13137 446 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 AUHQ13825 339 aaKnown RBP11.31□□□□□ -0.6
ECM1-201ENST00000346569 PDK1Q15118 436 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 PRKD1Q15139 912 aaPredicted RBP11.31□□□□□ -0.6
ECM1-201ENST00000346569 P3H1Q32P28 736 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 C5orf22Q49AR2 442 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 RNASEH2BQ5TBB1 312 aaKnown RBP11.31□□□□□ -0.6
ECM1-201ENST00000346569 IZUMO3Q5VZ72 239 aa11.31□□□□□ -0.6
ECM1-201ENST00000346569 NUGGCQ68CJ6 796 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms