RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TMEM191BP0C7N4 346 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 VDRP11473 427 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 NOMO3P69849 1222 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 LLGL2Q6P1M3 1020 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 ADGRF2Q8IZF7 708 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 FBXL8Q96CD0 374 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 UHRF1Q96T88 793 aaPredicted RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 SORT1Q99523 831 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 VRTNQ9H8Y1 702 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 MAGEE1Q9HCI5 957 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 C1orf112Q9NSG2 853 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 ZC3H7BQ9UGR2 993 aaKnown RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 DCDC2Q9UHG0 476 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 ROBO1Q9Y6N7 1651 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 ARHGEF35A5YM69 484 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 RGS13O14921 159 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 KMOO15229 486 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 ZBTB14O43829 449 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 FARP2O94887 1054 aaPredicted RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 GSRP00390 522 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 APOEP02649 317 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 PTPN1P18031 435 aaKnown RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 TCEA1P23193 301 aaKnown RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 MAP4P27816 1152 aaKnown RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 PIK3R1P27986 724 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 MS4A2Q01362 244 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 SPCS2Q15005 226 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 FAM47CQ5HY64 1035 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 NHSL2Q5HYW2 709 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 TTBK2Q6IQ55 1244 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 PPP4R4Q6NUP7 873 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 LINC00299Q6ZSB3 139 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 THNSL1Q8IYQ7 743 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 CADM3Q8N126 398 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 MYO1HQ8N1T3 1032 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 CPSF7Q8N684 471 aaKnown RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 PNPT1Q8TCS8 783 aaKnown RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 TANKQ92844 425 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 KLHL32Q96NJ5 620 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 RTFDC1Q9BY42 306 aaPredicted RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 YTHDF1Q9BYJ9 559 aaKnown RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 WDR12Q9GZL7 423 aaKnown RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 ATP11BQ9Y2G3 1177 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 RBMX2Q9Y388 322 aaKnown RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 PSME4Q14997 1843 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 TRIM38O00635 465 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 ENDOUP21128 410 aaKnown RBP18.97■□□□□ 0.63
SMPD1-201ENST00000342245 GLDCP23378 1020 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 ZNF76P36508 570 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 CEACAM7Q14002 265 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 KCNJ11Q14654 390 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 RAB39AQ14964 217 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 SF3B4Q15427 424 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMPD1-201ENST00000342245 Q3C1V9 767 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 TTC23LQ6PF05 361 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 OTOP1Q7RTM1 612 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 KRT27Q7Z3Y8 459 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 ZNF786Q8N393 782 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 TTC30BQ8N4P2 665 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 STON2Q8WXE9 905 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 ASB9Q96DX5 294 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 CEP44Q9C0F1 390 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 TRPV6Q9H1D0 765 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 ST6GALNAC4Q9H4F1 302 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 SERPINB13Q9UIV8 391 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 JAG2Q9Y219 1238 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 CORINQ9Y5Q5 1042 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 NOTOA8MTQ0 251 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 TADA2AO75478 443 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 DSG3P32926 999 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 TRAF2Q12933 501 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 PPIL2Q13356 520 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 SNRNP35Q16560 246 aaKnown RBP18.97■□□□□ 0.63
SMPD1-201ENST00000342245 QRICH1Q2TAL8 776 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 ZNF618Q5T7W0 954 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 LRRC49Q8IUZ0 686 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 ABRAQ8N0Z2 381 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 MFSD2AQ8NA29 543 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 LILRB4Q8NHJ6 448 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 RMDN3Q96TC7 470 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 MMP19Q99542 508 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 EFCAB1Q9HAE3 211 aa18.97■□□□□ 0.63
SMPD1-201ENST00000342245 DYTNA2CJ06 578 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 AREL1O15033 823 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 AKAP10O43572 662 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 CD247P20963 164 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 RCVRNP35243 200 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 PRELPP51888 382 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 HK2P52789 917 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 NME5P56597 212 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 RPL10AP62906 217 aaKnown RBP18.96■□□□□ 0.63
SMPD1-201ENST00000342245 INSCQ1MX18 579 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 GALNT18Q6P9A2 607 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 SNX32Q86XE0 403 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 TTC39CQ8N584 583 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 NIPA2Q8N8Q9 360 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 ANKFN1Q8N957 763 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 OR7G1Q8NGA0 311 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 TAS1R2Q8TE23 839 aa18.96■□□□□ 0.63
SMPD1-201ENST00000342245 RMND5AQ9H871 391 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms