RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 SGK2Q9HBY8 427 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 SCML1Q9UN30 329 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 PCDHGB2Q9Y5G2 931 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 KNL1Q8NG31 2342 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 CABIN1Q9Y6J0 2220 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 BICDL2A1A5D9 508 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 TRIM49BA6NDI0 452 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 M0QYV0 167 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 SART1O43290 800 aaKnown RBP13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 MSI1O43347 362 aaKnown RBP13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 ASLP04424 464 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 FTH1P19P0C7X4 201 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 PMS1P54277 932 aaKnown RBP13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 NUCB2P80303 420 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 BECN1Q14457 450 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 HLA-BQ31612 363 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 GLRX5Q86SX6 157 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 ADIPOR2Q86V24 386 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 MFN1Q8IWA4 741 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 UBR7Q8N806 425 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 HJURPQ8NCD3 748 aaPredicted RBP13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 ENGASEQ8NFI3 743 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 RHBDD1Q8TEB9 315 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 OSGEPQ9NPF4 335 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 PRSS16Q9NQE7 514 aa13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 KIAA1522Q9P206 1035 aaPredicted RBP13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.58□□□□□ -0.24
NECTIN1-203ENST00000341398 SETXQ7Z333 2677 aaKnown RBP13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 FLRT2O43155 660 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 MOCS3O95396 460 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 SEMA4FO95754 770 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 GNA14O95837 355 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 ACSL1P33121 698 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 ACADSBP45954 432 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 CSNK1EP49674 416 aaKnown RBP13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 ZNF776Q68DI1 518 aaPredicted RBP13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 RFWD3Q6PCD5 774 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 ADAT2Q7Z6V5 191 aaKnown RBP13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 ELOA2Q8IYF1 753 aaPredicted RBP13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 FIBINQ8TAL6 211 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 GANCQ8TET4 914 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 TFAP2BQ92481 460 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 SKA1Q96BD8 255 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 SERPINB11Q96P15 392 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 MIS12Q9H081 205 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 C6orf106Q9H6K1 298 aaPredicted RBP13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 STIM2Q9P246 746 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 PCOLCE2Q9UKZ9 415 aa13.57□□□□□ -0.24
NECTIN1-203ENST00000341398 A0A1B0GVT2 93 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 PIK3R2O00459 728 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 CAPN9O14815 690 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 DFNA5O60443 496 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 IGLV3-27P01718 113 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 C7P10643 843 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 BRD2P25440 801 aaKnown RBP13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 CD27P26842 260 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 GRIA4P48058 902 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 RPS14P62263 151 aaKnown RBP13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 GCNT1Q02742 428 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 NNTQ13423 1086 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 ACAP1Q15027 740 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 PTPRNQ16849 979 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 ISM2Q6H9L7 571 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 USP30Q70CQ3 517 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 ZNF366Q8N895 744 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 PNPLA1Q8N8W4 532 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 EHBP1Q8NDI1 1231 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 C1orf216Q8TAB5 229 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 FAM149B1Q96BN6 582 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 ST7Q9NRC1 585 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 SLC12A6Q9UHW9 1150 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 TLR6Q9Y2C9 796 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 AKAP13Q12802 2813 aa13.56□□□□□ -0.24
NECTIN1-203ENST00000341398 IGF2RP11717 2491 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 GOLGA6L7A0A1B0GV03 622 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 RNF225M0QZC1 329 aaPredicted RBP13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 MED7O43513 233 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 CBFA2T3O75081 653 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 FSBPO95073 299 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 FGFR1OPO95684 399 aaKnown RBP13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 CD70P32970 193 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 NNMTP40261 264 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 CDH18Q13634 790 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 INAVAQ3KP66 663 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 FAM133BQ5BKY9 247 aaKnown RBP13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 RNF219Q5W0B1 726 aaPredicted RBP13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 KLHL10Q6JEL2 608 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 FOXR2Q6PJQ5 311 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 LRSAM1Q6UWE0 723 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 DBX2Q6ZNG2 339 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 RRAGAQ7L523 313 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 CARNMT1Q8N4J0 409 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 KDM1BQ8NB78 822 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 ERCC4Q92889 916 aaPredicted RBP13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 TTC17Q96AE7 1141 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 BIRC7Q96CA5 298 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 IL21RQ9HBE5 538 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 TM9SF3Q9HD45 589 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 ANKRD6Q9Y2G4 727 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms