RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 SLC6A4P31645 630 aa21.3■■□□□ 1
CLDND1-201ENST00000341181 HARS2P49590 506 aaKnown RBP21.3■■□□□ 1
CLDND1-201ENST00000341181 ITIH3Q06033 890 aa21.3■■□□□ 1
CLDND1-201ENST00000341181 KLF1Q13351 362 aaPredicted RBP21.3■■□□□ 1
CLDND1-201ENST00000341181 ANKRD20A8PQ5CZ79 823 aa21.3■■□□□ 1
CLDND1-201ENST00000341181 CCDC181Q5TID7 509 aa21.3■■□□□ 1
CLDND1-201ENST00000341181 SMRP1Q8NCR6 262 aa21.3■■□□□ 1
CLDND1-201ENST00000341181 ZSCAN18Q8TBC5 510 aaPredicted RBP21.3■■□□□ 1
CLDND1-201ENST00000341181 FAM118BQ9BPY3 351 aa21.3■■□□□ 1
CLDND1-201ENST00000341181 AP1M1Q9BXS5 423 aa21.3■■□□□ 1
CLDND1-201ENST00000341181 RBM12Q9NTZ6 932 aaKnown RBP21.3■■□□□ 1
CLDND1-201ENST00000341181 ETNK2Q9NVF9 386 aa21.3■■□□□ 1
CLDND1-201ENST00000341181 VANGL2Q9ULK5 521 aa21.3■■□□□ 1
CLDND1-201ENST00000341181 DOCK8Q8NF50 2099 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 LEFTY2O00292 366 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 CKAP4Q07065 602 aaKnown RBP21.29■■□□□ 1
CLDND1-201ENST00000341181 PPP2R5EQ16537 467 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 MANEALQ5VSG8 457 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 RFWD3Q6PCD5 774 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 ARID3BQ8IVW6 561 aaPredicted RBP21.29■■□□□ 1
CLDND1-201ENST00000341181 UNC45BQ8IWX7 931 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 PQLC3Q8N755 202 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 ATP6V0D2Q8N8Y2 350 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 SH3RF2Q8TEC5 729 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 FAF2Q96CS3 445 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 PRMT1Q99873 361 aaKnown RBP21.29■■□□□ 1
CLDND1-201ENST00000341181 OSBPL2Q9H1P3 480 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 ARHGEF4Q9NR80 690 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 SAE1Q9UBE0 346 aaPredicted RBP21.29■■□□□ 1
CLDND1-201ENST00000341181 TTC7AQ9ULT0 858 aaPredicted RBP21.29■■□□□ 1
CLDND1-201ENST00000341181 TRIOO75962 3097 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 EEF2KO00418 725 aaKnown RBP21.29■■□□□ 1
CLDND1-201ENST00000341181 TRDMT1O14717 391 aaKnown RBP21.29■■□□□ 1
CLDND1-201ENST00000341181 PTPN7P35236 360 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 VSNL1P62760 191 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 AUHQ13825 339 aaKnown RBP21.29■■□□□ 1
CLDND1-201ENST00000341181 LONRF2Q1L5Z9 754 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 CES5AQ6NT32 575 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 RFX8Q6ZV50 586 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 MAP7D3Q8IWC1 876 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 ZNF683Q8IZ20 524 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 NETO2Q8NC67 525 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 HAUS1Q96CS2 278 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 POMKQ9H5K3 350 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 TDP1Q9NUW8 608 aa21.29■■□□□ 1
CLDND1-201ENST00000341181 PFKLP17858 780 aa21.28■■□□□ 1
CLDND1-201ENST00000341181 VCPP55072 806 aaKnown RBP21.28■■□□□ 1
CLDND1-201ENST00000341181 MLLT6P55198 1093 aaPredicted RBP21.28■■□□□ 1
CLDND1-201ENST00000341181 COPS2P61201 443 aa21.28■■□□□ 1
CLDND1-201ENST00000341181 DPYSQ14117 519 aa21.28■■□□□ 1
CLDND1-201ENST00000341181 SIX1Q15475 284 aaPredicted RBP21.28■■□□□ 1
CLDND1-201ENST00000341181 Q6ZNB5 142 aa21.28■■□□□ 1
CLDND1-201ENST00000341181 PPM1EQ8WY54 764 aa21.28■■□□□ 1
CLDND1-201ENST00000341181 RNF157Q96PX1 679 aa21.28■■□□□ 1
CLDND1-201ENST00000341181 R3HDM2Q9Y2K5 976 aaKnown RBP21.28■■□□□ 1
CLDND1-201ENST00000341181 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.27■■□□□ 1
CLDND1-201ENST00000341181 E9PAM4 449 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 ACSL4O60488 711 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 CST8O60676 142 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 FOSL2P15408 326 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 AMPD1P23109 780 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 ARL4AP40617 200 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 SGSHP51688 502 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 TPI1P60174 286 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 ATAT1Q5SQI0 421 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 FBXL22Q6P050 247 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 CHSY1Q86X52 802 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 RFX6Q8HWS3 928 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 RSPRY1Q96DX4 576 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 P2RY11Q96G91 374 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 LRRC3BQ96PB8 259 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 EPAS1Q99814 870 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 LRRC1Q9BTT6 524 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 MPP6Q9NZW5 540 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 MAP3K6O95382 1288 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 EPHB2P29323 1055 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 RWDD4Q6NW29 188 aaKnown RBP21.27■■□□□ 1
CLDND1-201ENST00000341181 CIR1Q86X95 450 aaPredicted RBP21.27■■□□□ 1
CLDND1-201ENST00000341181 BBS7Q8IWZ6 715 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 PLD5Q8N7P1 536 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 IGSF8Q969P0 613 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 ZBTB9Q96C00 473 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 PRICKLE1Q96MT3 831 aaPredicted RBP21.27■■□□□ 1
CLDND1-201ENST00000341181 SLC12A6Q9UHW9 1150 aa21.27■■□□□ 1
CLDND1-201ENST00000341181 DENND4AQ7Z401 1863 aa21.27■□□□□ 0.99
CLDND1-201ENST00000341181 NUP210Q8TEM1 1887 aaPredicted RBP21.26■□□□□ 0.99
CLDND1-201ENST00000341181 FAM78AQ5JUQ0 283 aa21.26■□□□□ 0.99
CLDND1-201ENST00000341181 GPR153Q6NV75 609 aa21.26■□□□□ 0.99
CLDND1-201ENST00000341181 NPNTQ6UXI9 565 aa21.26■□□□□ 0.99
CLDND1-201ENST00000341181 ATG4AQ8WYN0 398 aa21.26■□□□□ 0.99
CLDND1-201ENST00000341181 C1orf74Q96LT6 269 aa21.26■□□□□ 0.99
CLDND1-201ENST00000341181 MYADMQ96S97 322 aa21.26■□□□□ 0.99
CLDND1-201ENST00000341181 H3BRJ5 948 aa21.26■□□□□ 0.99
CLDND1-201ENST00000341181 PECAM1P16284 738 aaPredicted RBP21.26■□□□□ 0.99
CLDND1-201ENST00000341181 TACR2P21452 398 aa21.26■□□□□ 0.99
CLDND1-201ENST00000341181 KCNA5P22460 613 aa21.26■□□□□ 0.99
CLDND1-201ENST00000341181 SP100P23497 879 aaPredicted RBP21.26■□□□□ 0.99
CLDND1-201ENST00000341181 VIPR2P41587 438 aa21.26■□□□□ 0.99
CLDND1-201ENST00000341181 SLC11A2P49281 568 aa21.26■□□□□ 0.99
CLDND1-201ENST00000341181 SLC7A5Q01650 507 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms