RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CXCR3P49682 368 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 SGSHP51688 502 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 RPS24P62847 133 aaKnown RBP19.85■□□□□ 0.77
SYNE4-202ENST00000340477 ATP11AP98196 1134 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 PTP4A2Q12974 167 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 CRY1Q16526 586 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 GEN1Q17RS7 908 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 TSR1Q2NL82 804 aaKnown RBP19.85■□□□□ 0.77
SYNE4-202ENST00000340477 ARL13BQ3SXY8 428 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 EMC10Q5UCC4 262 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 EGFLAMQ63HQ2 1017 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 DCUN1D2Q6PH85 259 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 ZNF571Q7Z3V5 609 aaPredicted RBP19.85■□□□□ 0.77
SYNE4-202ENST00000340477 WDR5BQ86VZ2 330 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 RXFP2Q8WXD0 754 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 RPRD1AQ96P16 312 aaPredicted RBP19.85■□□□□ 0.77
SYNE4-202ENST00000340477 TKTL2Q9H0I9 626 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 ABCB8Q9NUT2 735 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 BCCIPQ9P287 314 aaKnown RBP eCLIP19.85■□□□□ 0.77
SYNE4-202ENST00000340477 XPO7Q9UIA9 1087 aaKnown RBP19.85■□□□□ 0.77
SYNE4-202ENST00000340477 MYO18AQ92614 2054 aaKnown RBP19.85■□□□□ 0.77
SYNE4-202ENST00000340477 SGK1O00141 431 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 AXIN1O15169 862 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 PAGE1O75459 146 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 LUC7L3O95232 432 aaKnown RBP19.84■□□□□ 0.77
SYNE4-202ENST00000340477 MOCS3O95396 460 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 LMNAP02545 664 aaKnown RBP19.84■□□□□ 0.77
SYNE4-202ENST00000340477 GYPCP04921 128 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 PABPC1P11940 636 aaKnown RBP19.84■□□□□ 0.77
SYNE4-202ENST00000340477 GZMAP12544 262 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 SKILP12757 684 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 GPD1P21695 349 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 PTPN9P43378 593 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 OXCT1P55809 520 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 STARD3Q14849 445 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 CDO1Q16878 200 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 OTUD1Q5VV17 481 aaPredicted RBP19.84■□□□□ 0.77
SYNE4-202ENST00000340477 E4F1Q66K89 784 aaPredicted RBP19.84■□□□□ 0.77
SYNE4-202ENST00000340477 LRRC31Q6UY01 552 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 CHST9Q7L1S5 443 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 MCOLN2Q8IZK6 566 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 CFAP52Q8N1V2 620 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.84■□□□□ 0.77
SYNE4-202ENST00000340477 P2RY11Q96G91 374 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 PHOX2BQ99453 314 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 SYT11Q9BT88 431 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.84■□□□□ 0.77
SYNE4-202ENST00000340477 SIK2Q9H0K1 926 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 ZDHHC4Q9NPG8 344 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 ELOVL2Q9NXB9 296 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 ARHGEF38Q9NXL2 777 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 CLEC4EQ9ULY5 219 aa19.84■□□□□ 0.77
SYNE4-202ENST00000340477 A0A1B0GVM2 712 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 TCAF2A6NFQ2 919 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 C2CD4BA6NLJ0 364 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 SIGLEC16A6NMB1 481 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 LILRB5O75023 590 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 ATP5BP06576 529 aaKnown RBP19.83■□□□□ 0.77
SYNE4-202ENST00000340477 HNRNPLP14866 589 aaKnown RBP eCLIP19.83■□□□□ 0.77
SYNE4-202ENST00000340477 POLR2EP19388 210 aaKnown RBP19.83■□□□□ 0.77
SYNE4-202ENST00000340477 HLA-FP30511 346 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 CASP14P31944 242 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 PXNP49023 591 aaPredicted RBP19.83■□□□□ 0.77
SYNE4-202ENST00000340477 ANO7Q6IWH7 933 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 CEP68Q76N32 757 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 FIBINQ8TAL6 211 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 MCEEQ96PE7 176 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 PARVAQ9NVD7 372 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 ZNHIT6Q9NWK9 470 aaKnown RBP19.83■□□□□ 0.77
SYNE4-202ENST00000340477 EBF1Q9UH73 591 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 PLA2G4CQ9UP65 541 aa19.83■□□□□ 0.77
SYNE4-202ENST00000340477 TCRBV21S2A2A0A5A6 115 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 GFRA3O60609 400 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 RTN2O75298 545 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 ADCY5O95622 1261 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 MYBL1P10243 752 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 TFE3P19532 575 aaPredicted RBP19.82■□□□□ 0.76
SYNE4-202ENST00000340477 RRM1P23921 792 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 WASP42768 502 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 MRE11P49959 708 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 DMWDQ09019 674 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 AUHQ13825 339 aaKnown RBP19.82■□□□□ 0.76
SYNE4-202ENST00000340477 RNF43Q68DV7 783 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 PRR23BQ6ZRT6 265 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 STRADAQ7RTN6 431 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 FAM131BQ86XD5 332 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 VSTM4Q8IW00 320 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 PGBD3Q8N328 593 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 JOSD2Q8TAC2 188 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 PPP1R9BQ96SB3 815 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 PRMT1Q99873 361 aaKnown RBP19.82■□□□□ 0.76
SYNE4-202ENST00000340477 TRIM5Q9C035 493 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 EPC1Q9H2F5 836 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 POLR3BQ9NW08 1133 aaPredicted RBP19.82■□□□□ 0.76
SYNE4-202ENST00000340477 CACNA2D2Q9NY47 1150 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 CALCOCO1Q9P1Z2 691 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 KIAA1522Q9P206 1035 aaPredicted RBP19.82■□□□□ 0.76
SYNE4-202ENST00000340477 VANGL2Q9ULK5 521 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 HS3ST4Q9Y661 456 aa19.82■□□□□ 0.76
SYNE4-202ENST00000340477 SCINQ9Y6U3 715 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms