RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SPCS2Q15005 226 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 INSCQ1MX18 579 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 IQSEC1Q6DN90 963 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 DCUN1D2Q6PH85 259 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 UNC5AQ6ZN44 842 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 SNX32Q86XE0 403 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 CPA6Q8N4T0 437 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 PAF1Q8N7H5 531 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 ADCY4Q8NFM4 1077 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 NEDD1Q8NHV4 660 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 C7orf26Q96N11 449 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 NACC1Q96RE7 527 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 SLCO3A1Q9UIG8 710 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 AP4E1Q9UPM8 1137 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 PCDHB13Q9Y5F0 798 aa9.9□□□□□ -0.82
PTCHD4-201ENST00000339488 CLUHO75153 1309 aa9.9□□□□□ -0.83
PTCHD4-201ENST00000339488 PSME4Q14997 1843 aa9.9□□□□□ -0.83
PTCHD4-201ENST00000339488 A0A087WXM4 84 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF839A8K0R7 811 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 CLDN25C9JDP6 229 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 INO80B-WBP1J3KQ70 363 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 SNAP91O60641 907 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 CCNKO75909 580 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 CD4P01730 458 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 PGRP06401 933 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 KRT3P12035 628 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 NMT1P30419 496 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 SOX5P35711 763 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 POLR2IP36954 125 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 HTR2BP41595 481 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 STX1BP61266 288 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 PRKCQQ04759 706 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 TUBA3CQ13748 450 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 IKBKEQ14164 716 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 FAM47AQ5JRC9 791 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ATG16L1Q676U5 607 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 CENPUQ71F23 418 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 TNS4Q8IZW8 715 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 SPARTQ8N0X7 666 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 VPS37AQ8NEZ2 397 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ZSCAN10Q96SZ4 725 aaPredicted RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 INO80BQ9C086 356 aaPredicted RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ABCB10Q9NRK6 738 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ARMC1Q9NVT9 282 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 SFMBT1Q9UHJ3 866 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 DNAJC12Q9UKB3 198 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 B3GNT3Q9Y2A9 372 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 AP4S1Q9Y587 144 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 PCDHAC2Q9Y5I4 1007 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 RTL9Q8NET4 1388 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 TCRBV5S4A2TA0A5A2 114 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 DENND3A2RUS2 1198 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 FAM172BPA6NC97 362 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ZBBXA8MT70 800 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 SGTAO43765 313 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 AKAP3O75969 853 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 KCNK2O95069 426 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 EPN2O95208 641 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ABHD2P08910 425 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 XRCC5P13010 732 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 AOC1P19801 751 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ITIH1P19827 911 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ECE1P42892 770 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 TXNL4AP83876 142 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 FAAP100Q0VG06 881 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 TRIM25Q14258 630 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 MSS51Q4VC12 460 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 METTL24Q5JXM2 366 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 FKBP9P1Q75LS8 142 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 PROM2Q8N271 834 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ZCCHC9Q8N567 271 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 CCDC89Q8N998 374 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 TMEM102Q8N9M5 508 aaPredicted RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 SPATA18Q8TC71 538 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 MZB1Q8WU39 189 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 FBXL20Q96IG2 436 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF778Q96MU6 729 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 NT5C1BQ96P26 610 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 CDRT15Q96T59 188 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 TDRD1Q9BXT4 1180 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 SCPEP1Q9HB40 452 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 MOV10Q9HCE1 1003 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 CAB39Q9Y376 341 aaPredicted RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 PKD1L3Q7Z443 1732 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 TYW5A2RUC4 315 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 TM9SF1O15321 606 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 TOM1L1O75674 476 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 GGPS1O95749 300 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 CALCAP01258 141 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 GLRA2P23416 452 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 EVI2BP34910 448 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 HSPA1LP34931 641 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ALDH7A1P49419 539 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 TDRPQ86YL5 185 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 FBXL6Q8N531 539 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 AGR3Q8TD06 166 aa9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 JPH3Q8WXH2 748 aaPredicted RBP9.89□□□□□ -0.83
PTCHD4-201ENST00000339488 ST8SIA2Q92186 375 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms