RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 C6orf203Q9P0P8 240 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 PSMC3IPQ9P2W1 217 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 GNPTGQ9UJJ9 305 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 DNM3Q9UQ16 869 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 ERVK-11Q9UQG0 969 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 ITM2BQ9Y287 266 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 RBMX2Q9Y388 322 aaKnown RBP5.76□□□□□ -1.49
CSDE1-202ENST00000339438 SQORQ9Y6N5 450 aa5.76□□□□□ -1.49
CSDE1-202ENST00000339438 PRSS51A0A1B0GVH4 220 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 CCDC160A6NGH7 325 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 RSPH10B2B2RC85 870 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 SOX1O00570 391 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 TGFB1I1O43294 461 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 UGT1A9O60656 530 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 FTLP02792 175 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 ADRB2P07550 413 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 RSPH10BP0C881 870 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 CHRNB1P11230 501 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 UGT1A6P19224 532 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 UGT1A1P22309 533 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 UGT1A4P22310 534 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 UGT1A3P35503 534 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 UGT1A5P35504 534 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 STAT3P40763 770 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 TUBA4AP68366 448 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 KCNA1Q09470 495 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 FAAP100Q0VG06 881 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 PDIA2Q13087 525 aaKnown RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 MSS51Q4VC12 460 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 SGO2Q562F6 1265 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 SEL1L2Q5TEA6 688 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 IZUMO3Q5VZ72 239 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 PPP2R2DQ66LE6 453 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 XKR5Q6UX68 686 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 TRIM72Q6ZMU5 477 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 NIPA1Q7RTP0 329 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 BTLAQ7Z6A9 289 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 VSIG10LQ86VR7 867 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 ANKMY2Q8IV38 441 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 DNERQ8NFT8 737 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 TSPAN14Q8NG11 270 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 SYTL5Q8TDW5 730 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 TBCKQ8TEA7 893 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 TFB1MQ8WVM0 346 aaKnown RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 ERLEC1Q96DZ1 483 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 FIZ1Q96SL8 496 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 AGPAT1Q99943 283 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 MROQ9BYG7 248 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 HIPK3Q9H422 1215 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 UGT1A7Q9HAW7 530 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 UGT1A10Q9HAW8 530 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 UGT1A8Q9HAW9 530 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 ASIC3Q9UHC3 531 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 CNOT11Q9UKZ1 510 aaKnown RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 PSMD13Q9UNM6 376 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 POC1B-GALNT4F8VUJ3 575 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 SPECC1L-ADORA2AF8WAN1 911 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 FOXN3O00409 490 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 PLOD2O00469 737 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 ZNF195O14628 629 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 PFDN6O15212 129 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 CLOCKO15516 846 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 DYNC1LI2O43237 492 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 MGEA5O60502 916 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 BANF1O75531 89 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 CIB2O75838 187 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 VDRP11473 427 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 PLS3P13797 630 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 RPL10P27635 214 aaKnown RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 DCKP27707 260 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 MAPK4P31152 587 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 ACADSBP45954 432 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 MRPS5P82675 430 aaKnown RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 IFITM3Q01628 133 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 CACNB1Q02641 598 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 GAD2Q05329 585 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 ADGRE1Q14246 886 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 LLGL1Q15334 1064 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 SIGIRRQ6IA17 410 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 ANO5Q75V66 913 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 VPS36Q86VN1 386 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 SLC15A4Q8N697 577 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 CHST13Q8NET6 341 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 ZNF597Q96LX8 424 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 CFAP57Q96MR6 1250 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 RNF19AQ9NV58 838 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 SIRPGQ9P1W8 387 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 CPA4Q9UI42 421 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 DNAJC12Q9UKB3 198 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 IFT52Q9Y366 437 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 A6NL46 340 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 PSMD12O00232 456 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 SLC16A3O15427 465 aaKnown RBP5.75□□□□□ -1.49
CSDE1-202ENST00000339438 SIN3BO75182 1162 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 TRPA1O75762 1119 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 H6PDO95479 791 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 TDP2O95551 362 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 CFBP00751 764 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 ATF2P15336 505 aa5.75□□□□□ -1.49
CSDE1-202ENST00000339438 EPHA3P29320 983 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms