RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 MSI1O43347 362 aaKnown RBP16.28■□□□□ 0.2
LINC01116-202ENST00000339037 ZNF202O95125 648 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 SEMA4FO95754 770 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 DNTTP04053 509 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 ATP5BP06576 529 aaKnown RBP16.28■□□□□ 0.2
LINC01116-202ENST00000339037 DLDP09622 509 aaKnown RBP16.28■□□□□ 0.2
LINC01116-202ENST00000339037 PABPC1P11940 636 aaKnown RBP16.28■□□□□ 0.2
LINC01116-202ENST00000339037 CUL2Q13617 745 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 SUZ12Q15022 739 aaKnown RBP16.28■□□□□ 0.2
LINC01116-202ENST00000339037 PTPRNQ16849 979 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 TTC31Q49AM3 519 aaPredicted RBP16.28■□□□□ 0.2
LINC01116-202ENST00000339037 CBWD6Q4V339 395 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 CBWD3Q5JTY5 395 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 CBWD5Q5RIA9 395 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 DBX2Q6ZNG2 339 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC01116-202ENST00000339037 MDM1Q8TC05 714 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 RHBDD1Q8TEB9 315 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 BTBD1Q9H0C5 482 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 ABCC13Q9NSE7 274 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 TOR4AQ9NXH8 423 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 ATXN1LP0C7T5 689 aaKnown RBP16.27■□□□□ 0.2
LINC01116-202ENST00000339037 SETSIPP0DME0 302 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 GRIA4P48058 902 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
LINC01116-202ENST00000339037 RPS14P62263 151 aaKnown RBP16.27■□□□□ 0.2
LINC01116-202ENST00000339037 MBLAC2Q68D91 279 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 C19orf48Q6RUI8 117 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 TMPRSS7Q7RTY8 843 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 GOLGA1Q92805 767 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 BIRC7Q96CA5 298 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 CCDC34Q96HJ3 373 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 TM9SF3Q9HD45 589 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 OSGEPQ9NPF4 335 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 PRSS16Q9NQE7 514 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 CNGB3Q9NQW8 809 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 ANKRD6Q9Y2G4 727 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 SNX11Q9Y5W9 270 aa16.27■□□□□ 0.2
LINC01116-202ENST00000339037 GOLGA4Q13439 2230 aaKnown RBP16.27■□□□□ 0.19
LINC01116-202ENST00000339037 MUC22E2RYF6 1773 aaPredicted RBP16.26■□□□□ 0.19
LINC01116-202ENST00000339037 O00370 1275 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 SLC16A3O15427 465 aaKnown RBP16.26■□□□□ 0.19
LINC01116-202ENST00000339037 FSBPO95073 299 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 POLR2EP19388 210 aaKnown RBP16.26■□□□□ 0.19
LINC01116-202ENST00000339037 CD27P26842 260 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 GRK6P43250 576 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 SGSHP51688 502 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 MPP7Q5T2T1 576 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 RFWD3Q6PCD5 774 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 LAYNQ6UX15 382 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 KIAA0907Q7Z7F0 614 aaPredicted RBP16.26■□□□□ 0.19
LINC01116-202ENST00000339037 ZC3H3Q8IXZ2 948 aaKnown RBP16.26■□□□□ 0.19
LINC01116-202ENST00000339037 UBA3Q8TBC4 463 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 KCTD13Q8WZ19 329 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 IGSF8Q969P0 613 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 SGK2Q9HBY8 427 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.26■□□□□ 0.19
LINC01116-202ENST00000339037 BTBD3Q9Y2F9 522 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 RAXQ9Y2V3 346 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 COQ4Q9Y3A0 265 aa16.26■□□□□ 0.19
LINC01116-202ENST00000339037 GOLGA8CPA6NN73 597 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 IRAK2O43187 625 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 TBL1XO60907 577 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 DKK1O94907 266 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 VDRP11473 427 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 LCP1P13796 627 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 TBXAS1P24557 533 aaPredicted RBP16.25■□□□□ 0.19
LINC01116-202ENST00000339037 CD70P32970 193 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 SLC11A2P49281 568 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 CCT8P50990 548 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 DAOAP59103 153 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 PNOCQ13519 176 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 PIK3R6Q5UE93 754 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 NUGGCQ68CJ6 796 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 ZNF776Q68DI1 518 aaPredicted RBP16.25■□□□□ 0.19
LINC01116-202ENST00000339037 MSANTD2Q6P1R3 559 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 ADAT2Q7Z6V5 191 aaKnown RBP16.25■□□□□ 0.19
LINC01116-202ENST00000339037 PDZD3Q86UT5 571 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 SCML4Q8N228 414 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 GALNT15Q8N3T1 639 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 ZNF557Q8N988 423 aaPredicted RBP16.25■□□□□ 0.19
LINC01116-202ENST00000339037 WFDC5Q8TCV5 224 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 KIAA1257Q9ULG3 409 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 PLXNB3Q9ULL4 1909 aa16.25■□□□□ 0.19
LINC01116-202ENST00000339037 URB1O60287 2271 aaKnown RBP16.24■□□□□ 0.19
LINC01116-202ENST00000339037 TNFSF14O43557 240 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 PCDHGA12O60330 932 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 IGLV3-27P01718 113 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 FKBP3Q00688 224 aaKnown RBP16.24■□□□□ 0.19
LINC01116-202ENST00000339037 COL28A1Q2UY09 1125 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 INAVAQ3KP66 663 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 PKDCCQ504Y2 493 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 FAM133BQ5BKY9 247 aaKnown RBP16.24■□□□□ 0.19
LINC01116-202ENST00000339037 LCLAT1Q6UWP7 414 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 MFN1Q8IWA4 741 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 UNC45BQ8IWX7 931 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 FMR1NBQ8N0W7 255 aaPredicted RBP16.24■□□□□ 0.19
LINC01116-202ENST00000339037 ENGASEQ8NFI3 743 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 TSG101Q99816 390 aa16.24■□□□□ 0.19
LINC01116-202ENST00000339037 IRX2Q9BZI1 471 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms