RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 KLHL4Q9C0H6 718 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 SEMA6AQ9H2E6 1030 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 ATP13A1Q9HD20 1204 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 COPZ1P61923 177 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 MPP3Q13368 585 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 RASA2Q15283 850 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 APBA2Q99767 749 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 CBWD1Q9BRT8 395 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 MAT2BQ9NZL9 334 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 VPS51Q9UID3 782 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 COG5Q9UP83 839 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 RPL4P36578 427 aaKnown RBP12.02□□□□□ -0.49
SHANK2-201ENST00000338508 KCNMA1Q12791 1236 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 CCNI2Q6ZMN8 369 aaPredicted RBP12.02□□□□□ -0.49
SHANK2-201ENST00000338508 MILR1Q7Z6M3 343 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 OR10G6Q8NH81 332 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 VPS33AQ96AX1 596 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 DGCR6LQ9BY27 220 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 AASDHPPTQ9NRN7 309 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 CCDC167Q9P0B6 97 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 ATP7BP35670 1465 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 CES2O00748 559 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 RCVRNP35243 200 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 IL12RB1P42701 662 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 EIF2B2P49770 351 aaKnown RBP12.02□□□□□ -0.49
SHANK2-201ENST00000338508 GNA13Q14344 377 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 BOLA3Q53S33 107 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 RBM23Q86U06 439 aaKnown RBP12.02□□□□□ -0.49
SHANK2-201ENST00000338508 JMJD4Q9H9V9 463 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 GPN3Q9UHW5 284 aaPredicted RBP12.02□□□□□ -0.49
SHANK2-201ENST00000338508 RAD54BQ9Y620 910 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 ADGRL3Q9HAR2 1447 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 WDR27A2RRH5 827 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 TRDMT1O14717 391 aaKnown RBP12.02□□□□□ -0.49
SHANK2-201ENST00000338508 OR56A5P0C7T3 313 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 PRG2P13727 222 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 CCT3P49368 545 aaKnown RBP12.02□□□□□ -0.49
SHANK2-201ENST00000338508 HK2P52789 917 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 MARC1Q5VT66 337 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 C9orf131Q5VYM1 1079 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 DEFB107AQ8IZN7 70 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 RXFP2Q8WXD0 754 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 PHF20Q9BVI0 1012 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 SNCAIPQ9Y6H5 919 aa12.02□□□□□ -0.49
SHANK2-201ENST00000338508 H3BMM5 538 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 GTPBP1O00178 669 aaKnown RBP12.01□□□□□ -0.49
SHANK2-201ENST00000338508 BTN3A1O00481 513 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 HSPA13P48723 471 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 NPY2RP49146 381 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 PUDPQ08623 228 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 KLHDC7AQ5VTJ3 777 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 ESRP1Q6NXG1 681 aaKnown RBP12.01□□□□□ -0.49
SHANK2-201ENST00000338508 C4orf22Q6V702 233 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 C3orf67Q6ZVT6 689 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 TPCN2Q8NHX9 752 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 SPATA20Q8TB22 786 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 REXO5Q96IC2 774 aaKnown RBP12.01□□□□□ -0.49
SHANK2-201ENST00000338508 MARK4Q96L34 752 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 FAM50BQ9Y247 325 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 MAGI2Q86UL8 1455 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 PLEKHG2Q9H7P9 1386 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 ANKDD1BA6NHY2 528 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 CCDC85CA6NKD9 419 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 FOXN3O00409 490 aaPredicted RBP12.01□□□□□ -0.49
SHANK2-201ENST00000338508 CXCL8P10145 99 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 ERCC2P18074 760 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 SLC1A6P48664 564 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 CEBPGP53567 150 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 KRR1Q13601 381 aaKnown RBP12.01□□□□□ -0.49
SHANK2-201ENST00000338508 PMF1Q6P1K2 205 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 MPZL3Q6UWV2 235 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 EXOC2Q96KP1 924 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 TINF2Q9BSI4 451 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 GBA2Q9HCG7 927 aaPredicted RBP12.01□□□□□ -0.49
SHANK2-201ENST00000338508 MRGBPQ9NV56 204 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 CCR1P32246 355 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 HPCAL1P37235 193 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 ARMC3Q5W041 872 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 FBXO39Q8N4B4 442 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 ATP6V1C2Q8NEY4 427 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 EPB41L4BQ9H329 900 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 AGPAT3Q9NRZ7 376 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 OR10H1Q9Y4A9 318 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 TAF6LQ9Y6J9 622 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 RBAK-RBAKDNI3L0D1 243 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 AREL1O15033 823 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 HOXA2O43364 376 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 RAMP2O60895 175 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 CPA3P15088 417 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 PTPN1P18031 435 aaKnown RBP12.01□□□□□ -0.49
SHANK2-201ENST00000338508 GSTM5P46439 218 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 DGCR6Q14129 220 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 OVOS1Q6IE37 1185 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 ZNF677Q86XU0 584 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 DAW1Q8N136 415 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 RIBC1Q8N443 379 aaPredicted RBP12.01□□□□□ -0.49
SHANK2-201ENST00000338508 MCOLN3Q8TDD5 553 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 CEP44Q9C0F1 390 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 MCUBQ9NWR8 336 aa12.01□□□□□ -0.49
SHANK2-201ENST00000338508 ZNF232Q9UNY5 417 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms