RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 NOGQ13253 232 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 GRTP1Q5TC63 336 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 PTAR1Q7Z6K3 402 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 YTHDF3Q7Z739 585 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 PRPF39Q86UA1 669 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 HMGXB4Q9UGU5 601 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 NOL3O60936 208 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 RHOBTB1O94844 696 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 AVPR1AP37288 418 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 ZNF792Q3KQV3 632 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 KIRREL3Q8IZU9 778 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 FUKQ8N0W3 1084 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 UPF1Q92900 1129 aaKnown RBP eCLIP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 CASQ2O14958 399 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 RHOCP08134 193 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 ENO3P13929 434 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 TCF4P15884 667 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 CCL14Q16627 93 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 MFSD5Q6N075 450 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 DEFB128Q7Z7B8 93 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 EBNA1BP2Q99848 306 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 RNF39Q9H2S5 420 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 C5P01031 1676 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 BCLAF3A2AJT9 711 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 ABCG1P45844 678 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 OXCT1P55809 520 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 TCEAL1Q15170 157 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 PDK4Q16654 411 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 ANKRD22Q5VYY1 191 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 TTC30AQ86WT1 665 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 BLOC1S5Q8TDH9 187 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 HNRNPABQ99729 332 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 NDE1Q9NXR1 346 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 STARD13Q9Y3M8 1113 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 L3MBTL1Q9Y468 752 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 EDF1O60869 148 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 ENDOD1O94919 500 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 KCNA4P22459 653 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 SFSWAPQ12872 951 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 GRIK3Q13003 919 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 TUSC3Q13454 348 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 AGAP9Q5VTM2 703 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 C16orf46Q6P387 395 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 MYLPFQ96A32 169 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 BAG5Q9UL15 447 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 MRPL42Q9Y6G3 142 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 ELNP15502 786 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 SERPINB3P29508 390 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 CSPG4P5Q96PW8 444 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 LAMA4Q16363 1823 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 TCRBV9S1A1TA0A576 114 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 TUFMP49411 452 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 CDC26Q8NHZ8 85 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 CERS2Q96G23 380 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 KCNK16Q96T55 309 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 LPIN3Q9BQK8 851 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 TRIM54Q9BYV2 358 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 UBE2OQ9C0C9 1292 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 SIX4Q9UIU6 781 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 A0A096LPK6 155 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 C2orf81A6NN90 581 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 MPOP05164 745 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 PSMB4P28070 264 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 KPNA1P52294 538 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 CDCA2Q69YH5 1023 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 DCLRE1AQ6PJP8 1040 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 ZNF467Q7Z7K2 595 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 CINPQ9BW66 212 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 SLC45A1Q9Y2W3 748 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 PTPN4P29074 926 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 RHOAP61586 193 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 TWF1Q12792 350 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 USP6NLQ92738 828 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 CMTM5Q96DZ9 223 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 XYLT2Q9H1B5 865 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 PIDD1Q9HB75 910 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 SLCO1B3Q9NPD5 702 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 PKD1L3Q7Z443 1732 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 UNCXA6NJT0 531 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 TULP2O00295 520 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 GNGT2O14610 69 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 SERPINE1P05121 402 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 SERPINF2P08697 491 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 PRKAR2AP13861 404 aaKnown RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 IL1R2P27930 398 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 SERPINB8P50452 374 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 ITGA9Q13797 1035 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 GOLGA8TH3BQL2 631 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 DPYSL4O14531 572 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 IMPG1Q17R60 797 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 DEFB115Q30KQ5 88 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 ZRANB3Q5FWF4 1079 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 UNC5AQ6ZN44 842 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 KCNMB4Q86W47 210 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 REM2Q8IYK8 340 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 GIPC2Q8TF65 315 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 TLCD1Q96CP7 247 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 CCDC126Q96EE4 140 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 AFF4Q9UHB7 1163 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms