RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 ENC1O14682 589 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 VILLO15195 856 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 ZSCAN22P10073 491 aaPredicted RBP11.96□□□□□ -0.49
CSMD2-202ENST00000338325 RPL13P26373 211 aaKnown RBP11.96□□□□□ -0.49
CSMD2-202ENST00000338325 CD70P32970 193 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 HNF1BP35680 557 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 MXI1P50539 228 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 SGSHP51688 502 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 ADIGQ0VDE8 80 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 FBXL13Q8NEE6 735 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 PIP4K2CQ8TBX8 421 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 WFDC5Q8TCV5 224 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 EDEM1Q92611 657 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 CCDC47Q96A33 483 aaKnown RBP11.96□□□□□ -0.49
CSMD2-202ENST00000338325 SLC6A18Q96N87 628 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 IPO9Q96P70 1041 aaKnown RBP11.96□□□□□ -0.49
CSMD2-202ENST00000338325 RSPH9Q9H1X1 276 aaPredicted RBP11.96□□□□□ -0.49
CSMD2-202ENST00000338325 PABPC3Q9H361 631 aaKnown RBP11.96□□□□□ -0.49
CSMD2-202ENST00000338325 ABCC13Q9NSE7 274 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 TSPAN16Q9UKR8 245 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 CFAP45Q9UL16 551 aa11.96□□□□□ -0.49
CSMD2-202ENST00000338325 A0A1W2PPC4 97 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 FAM47DPA6NHR8 397 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 YJEFN3A6XGL0 299 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 E7ENQ6 273 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 MSI1O43347 362 aaKnown RBP11.96□□□□□ -0.5
CSMD2-202ENST00000338325 TBL1XO60907 577 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 RFPL3O75679 317 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 RHOBTB3O94955 611 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 CDK4P11802 303 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 PFKFB1P16118 471 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 BST2Q10589 180 aaKnown RBP11.96□□□□□ -0.5
CSMD2-202ENST00000338325 SFSWAPQ12872 951 aaKnown RBP11.96□□□□□ -0.5
CSMD2-202ENST00000338325 MPP7Q5T2T1 576 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 C6orf118Q5T5N4 469 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 BSPRYQ5W0U4 402 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 GATAD2AQ86YP4 633 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 SIX6OS1Q8N1H7 587 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 ZNF557Q8N988 423 aaPredicted RBP11.96□□□□□ -0.5
CSMD2-202ENST00000338325 ADAM32Q8TC27 787 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 GANCQ8TET4 914 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 TATDN2Q93075 761 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 SKA1Q96BD8 255 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 CNDP2Q96KP4 475 aaKnown RBP11.96□□□□□ -0.5
CSMD2-202ENST00000338325 ELF4Q99607 663 aaPredicted RBP11.96□□□□□ -0.5
CSMD2-202ENST00000338325 IRX2Q9BZI1 471 aaPredicted RBP11.96□□□□□ -0.5
CSMD2-202ENST00000338325 RAB20Q9NX57 234 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 FBXL12Q9NXK8 326 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 HESX1Q9UBX0 185 aa11.96□□□□□ -0.5
CSMD2-202ENST00000338325 A0A1B0GVL5 298 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 YKT6O15498 198 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 STX10O60499 249 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 RNASEH1O60930 286 aaKnown RBP11.95□□□□□ -0.5
CSMD2-202ENST00000338325 LDOC1O95751 146 aaPredicted RBP11.95□□□□□ -0.5
CSMD2-202ENST00000338325 ITGAVP06756 1048 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 C1SP09871 688 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 JUPP14923 745 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 ABCB4P21439 1286 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 GALCP54803 685 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 MCCD1P59942 119 aaPredicted RBP11.95□□□□□ -0.5
CSMD2-202ENST00000338325 ST8SIA6P61647 398 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 C19orf57Q0VDD7 668 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 ADAM9Q13443 819 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 HNRNPA1L2Q32P51 320 aaKnown RBP11.95□□□□□ -0.5
CSMD2-202ENST00000338325 SGO2Q562F6 1265 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 PIK3R6Q5UE93 754 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 MSANTD2Q6P1R3 559 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 RFWD3Q6PCD5 774 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 NCEH1Q6PIU2 408 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 MFN1Q8IWA4 741 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 GUF1Q8N442 669 aaKnown RBP11.95□□□□□ -0.5
CSMD2-202ENST00000338325 MYO19Q96H55 970 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 MTG2Q9H4K7 406 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 SERGEFQ9UGK8 458 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 RCOR1Q9UKL0 485 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 MAPK8IP1Q9UQF2 711 aa11.95□□□□□ -0.5
CSMD2-202ENST00000338325 LRRC72A6NJI9 287 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 TK2O00142 265 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 CBX4O00257 560 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 IRAK2O43187 625 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 SIN3BO75182 1162 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 IGLV3-27P01718 113 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 ASLP04424 464 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 WNT1P04628 370 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 SETSIPP0DME0 302 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 ITPKBP27987 946 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 SLC6A4P31645 630 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 SLC11A2P49281 568 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 CLDN6P56747 220 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 DAOAP59103 153 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 DNM1Q05193 864 aaKnown RBP11.94□□□□□ -0.5
CSMD2-202ENST00000338325 DNAJC3Q13217 504 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 SHBQ15464 509 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 CST6Q15828 149 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 ZCWPW2Q504Y3 356 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 FAM133BQ5BKY9 247 aaKnown RBP11.94□□□□□ -0.5
CSMD2-202ENST00000338325 PRAMEF14Q5SWL7 426 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 NUGGCQ68CJ6 796 aa11.94□□□□□ -0.5
CSMD2-202ENST00000338325 LRRC69Q6ZNQ3 347 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms