RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 COPAP53621 1224 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 STX17P56962 302 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 SFSWAPQ12872 951 aaKnown RBP11.08□□□□□ -0.64
CAPN3-202ENST00000337571 PAK1Q13153 545 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 CAMK2GQ13555 558 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-202ENST00000337571 TRIP6Q15654 476 aaKnown RBP11.08□□□□□ -0.64
CAPN3-202ENST00000337571 PIK3R6Q5UE93 754 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 MBLAC2Q68D91 279 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 TTI2Q6NXR4 508 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 IL27RAQ6UWB1 636 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 PIP4P1Q86T03 277 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 ADIPOR2Q86V24 386 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 ZCCHC9Q8N567 271 aaKnown RBP11.08□□□□□ -0.64
CAPN3-202ENST00000337571 OR2I1PQ8NGU4 316 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 SNX19Q92543 992 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 FAM149B1Q96BN6 582 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 SERPINB11Q96P15 392 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 SCNM1Q9BWG6 230 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 ADAM33Q9BZ11 813 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 PCED1AQ9H1Q7 454 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 LHX5Q9H2C1 402 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 FBRSQ9HAH7 460 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 UBE2TQ9NPD8 197 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-202ENST00000337571 STIM2Q9P246 746 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 NCKAP1Q9Y2A7 1128 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 TLR6Q9Y2C9 796 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 GON4LQ3T8J9 2241 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 GOLGA6L7A0A1B0GV03 622 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 TMEM8BA6NDV4 472 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 C1QTNF9BB2RNN3 333 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 RNASEH1O60930 286 aaKnown RBP11.07□□□□□ -0.64
CAPN3-202ENST00000337571 MOCS3O95396 460 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 IGLV3-19P01714 112 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 DLDP09622 509 aaKnown RBP11.07□□□□□ -0.64
CAPN3-202ENST00000337571 C1QTNF9P0C862 333 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 CD59P13987 128 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 ZBTB16Q05516 673 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 GRIK2Q13002 908 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 MORC3Q14149 939 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 ZNF423Q2M1K9 1284 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 TTC31Q49AM3 519 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-202ENST00000337571 RFWD3Q6PCD5 774 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 ENOSF1Q7L5Y1 443 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 ARHGEF19Q8IW93 802 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 MFN1Q8IWA4 741 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 TRIM59Q8IWR1 403 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 CARNMT1Q8N4J0 409 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 HJURPQ8NCD3 748 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-202ENST00000337571 LMO3Q8TAP4 145 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 GANCQ8TET4 914 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 SETD7Q8WTS6 366 aaKnown RBP11.07□□□□□ -0.64
CAPN3-202ENST00000337571 CLEC4CQ8WTT0 213 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 KAT5Q92993 513 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 FAM81BQ96LP2 452 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 MED15Q96RN5 788 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 INTS2Q9H0H0 1204 aaKnown RBP11.07□□□□□ -0.64
CAPN3-202ENST00000337571 TMEM245Q9H330 911 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 SLC12A6Q9UHW9 1150 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 EIF2B4Q9UI10 523 aaKnown RBP11.07□□□□□ -0.64
CAPN3-202ENST00000337571 NEUROG3Q9Y4Z2 214 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 CHD8Q9HCK8 2581 aa11.07□□□□□ -0.64
CAPN3-202ENST00000337571 ASCC3Q8N3C0 2202 aaKnown RBP11.07□□□□□ -0.64
CAPN3-202ENST00000337571 HYAL3O43820 417 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-202ENST00000337571 SH3BP5O60239 455 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 LETM1O95202 739 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-202ENST00000337571 CER1O95813 267 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 TOP3BO95985 862 aaKnown RBP11.06□□□□□ -0.64
CAPN3-202ENST00000337571 CALCAP01258 141 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 IGLV3-27P01718 113 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 APOEP02649 317 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 ASLP04424 464 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 SLC6A4P31645 630 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 CD70P32970 193 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 USP8P40818 1118 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 MATKP42679 507 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 GPD2P43304 727 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 AFF3P51826 1226 aaKnown RBP11.06□□□□□ -0.64
CAPN3-202ENST00000337571 MARSP56192 900 aaKnown RBP11.06□□□□□ -0.64
CAPN3-202ENST00000337571 CDH18Q13634 790 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 SUZ12Q15022 739 aaKnown RBP11.06□□□□□ -0.64
CAPN3-202ENST00000337571 TEAD4Q15561 434 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 RNF219Q5W0B1 726 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-202ENST00000337571 KIAA0907Q7Z7F0 614 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-202ENST00000337571 NAXDQ8IW45 347 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 ZNF366Q8N895 744 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.06□□□□□ -0.64
CAPN3-202ENST00000337571 FIBINQ8TAL6 211 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 STK32AQ8WU08 396 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 BTBD1Q9H0C5 482 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 GAREM1Q9H706 876 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 PRSS16Q9NQE7 514 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 TJP2Q9UDY2 1190 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 SCML1Q9UN30 329 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 LHX6Q9UPM6 363 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 NAALADL1Q9UQQ1 740 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 CEP83Q9Y592 693 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 TPRP12270 2363 aaKnown RBP11.06□□□□□ -0.64
CAPN3-202ENST00000337571 PCDH15Q96QU1 1955 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 EPG5Q9HCE0 2579 aa11.06□□□□□ -0.64
CAPN3-202ENST00000337571 CKAP5Q14008 2032 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms