RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 ZNF195O14628 629 aa10.4□□□□□ -0.74
HIF1A-202ENST00000337138 TSHRP16473 764 aa10.4□□□□□ -0.74
HIF1A-202ENST00000337138 ADORA2AP29274 412 aa10.4□□□□□ -0.74
HIF1A-202ENST00000337138 STIP1P31948 543 aaKnown RBP10.4□□□□□ -0.74
HIF1A-202ENST00000337138 ARRB2P32121 409 aa10.4□□□□□ -0.74
HIF1A-202ENST00000337138 RPL34P49207 117 aaKnown RBP10.4□□□□□ -0.74
HIF1A-202ENST00000337138 ANGEL2Q5VTE6 544 aaKnown RBP10.4□□□□□ -0.74
HIF1A-202ENST00000337138 HPS6Q86YV9 775 aa10.4□□□□□ -0.74
HIF1A-202ENST00000337138 ARL10Q8N8L6 244 aa10.4□□□□□ -0.74
HIF1A-202ENST00000337138 NLRP7Q8WX94 980 aa10.4□□□□□ -0.74
HIF1A-202ENST00000337138 MCRS1Q96EZ8 462 aa10.4□□□□□ -0.74
HIF1A-202ENST00000337138 CNBD2Q96M20 576 aa10.4□□□□□ -0.74
HIF1A-202ENST00000337138 SPATA33Q96N06 139 aa10.4□□□□□ -0.74
HIF1A-202ENST00000337138 UBE2OQ9C0C9 1292 aaKnown RBP10.4□□□□□ -0.74
HIF1A-202ENST00000337138 PLLPQ9Y342 182 aa10.4□□□□□ -0.74
HIF1A-202ENST00000337138 GBF1Q92538 1859 aa10.4□□□□□ -0.75
HIF1A-202ENST00000337138 CPOXP36551 454 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 CYLC2Q14093 348 aaPredicted RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 PTAR1Q7Z6K3 402 aaPredicted RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 PYROXD2Q8N2H3 581 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 DCLK2Q8N568 766 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 KIF12Q96FN5 646 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 FAM49AQ9H0Q0 323 aaPredicted RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 VRTNQ9H8Y1 702 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 KRT82Q9NSB4 513 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 TPP1O14773 563 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 NOL3O60936 208 aaKnown RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 APOEP02649 317 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 STAG3L1P0CL83 205 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 MGAT1P26572 445 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 L1CAMP32004 1257 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 KCNT2Q6UVM3 1135 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 ZBTB46Q86UZ6 589 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 CAND1Q86VP6 1230 aaKnown RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 PLD5Q8N7P1 536 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 CLEC4CQ8WTT0 213 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 SGF29Q96ES7 293 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 ACO2Q99798 780 aaKnown RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 MINDY3Q9H8M7 445 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 TMPRSS4Q9NRS4 437 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 MTMR10Q9NXD2 777 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 STX18Q9P2W9 335 aaKnown RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 HES2Q9Y543 173 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 NYNRINQ9P2P1 1898 aaKnown RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 RFPL1O75677 317 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 ENO3P13929 434 aaPredicted RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 NELFEP18615 380 aaKnown RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 RABGGTBP53611 331 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 PKNOX1P55347 436 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 MTHFD1LQ6UB35 978 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 FBXO16Q8IX29 292 aaPredicted RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 C1orf127Q8N9H9 656 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 SEPT1Q8WYJ6 367 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 RNF157Q96PX1 679 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 SNRNP25Q9BV90 132 aaKnown RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 CAB39LQ9H9S4 337 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 PPCSQ9HAB8 311 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 A0A087WZ62 844 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 TMCC1O94876 653 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 FARP2O94887 1054 aaPredicted RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 LYNP07948 512 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 TPH1P17752 444 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 PRKCHP24723 683 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 CYP2F1P24903 491 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 AVPR1AP37288 418 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 SLC1A6P48664 564 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 COPAP53621 1224 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 MAP1SQ66K74 1059 aaPredicted RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 PID1Q7Z2X4 250 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 C10orf107Q8IVU9 208 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 TRIM42Q8IWZ5 723 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 RTKN2Q8IZC4 609 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 SLC4A11Q8NBS3 891 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 DPF3Q92784 378 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 TRAPPC9Q96Q05 1148 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 PHF12Q96QT6 1004 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 FDXACB1Q9BRP7 624 aaPredicted RBP10.39□□□□□ -0.75
HIF1A-202ENST00000337138 NUF2Q9BZD4 464 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 ZNF518BQ9C0D4 1074 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 AS3MTQ9HBK9 375 aa10.39□□□□□ -0.75
HIF1A-202ENST00000337138 MYOCOSA0A1B0GUC4 107 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 NDC80O14777 642 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 HNRNPCL1O60812 293 aaKnown RBP10.38□□□□□ -0.75
HIF1A-202ENST00000337138 MT-CO1P00395 513 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 CAPNS1P04632 268 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 RAG1P15918 1043 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 PEX2P28328 305 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 GMPSP49915 693 aaPredicted RBP10.38□□□□□ -0.75
HIF1A-202ENST00000337138 GALK1P51570 392 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 IFRD2Q12894 506 aaPredicted RBP10.38□□□□□ -0.75
HIF1A-202ENST00000337138 SPNS2Q8IVW8 549 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 APLFQ8IW19 511 aaPredicted RBP10.38□□□□□ -0.75
HIF1A-202ENST00000337138 SPATA6LQ8N4H0 392 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 CCNYL1Q8N7R7 359 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 DRAXINQ8NBI3 349 aaPredicted RBP10.38□□□□□ -0.75
HIF1A-202ENST00000337138 SLC7A14Q8TBB6 771 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 GDPD5Q8WTR4 605 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 CDKL2Q92772 493 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 GATA6Q92908 595 aa10.38□□□□□ -0.75
HIF1A-202ENST00000337138 ECSITQ9BQ95 431 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms