RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 SLC5A9Q2M3M2 681 aa20.49■□□□□ 0.87
CDCA4-201ENST00000336219 SATL1Q86VE3 508 aa20.49■□□□□ 0.87
CDCA4-201ENST00000336219 SESTD1Q86VW0 696 aa20.49■□□□□ 0.87
CDCA4-201ENST00000336219 KIF12Q96FN5 646 aa20.49■□□□□ 0.87
CDCA4-201ENST00000336219 MRPL45Q9BRJ2 306 aaKnown RBP20.49■□□□□ 0.87
CDCA4-201ENST00000336219 CENPKQ9BS16 269 aa20.49■□□□□ 0.87
CDCA4-201ENST00000336219 B3GNT5Q9BYG0 378 aa20.49■□□□□ 0.87
CDCA4-201ENST00000336219 FAM49BQ9NUQ9 324 aa20.49■□□□□ 0.87
CDCA4-201ENST00000336219 TPP1O14773 563 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 SETSIPP0DME0 302 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 DESP17661 470 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 L1CAMP32004 1257 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 SERPINB6P35237 376 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 FBXL19Q6PCT2 694 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 NT5DC4Q86YG4 428 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 ST13P4Q8IZP2 240 aaPredicted RBP20.48■□□□□ 0.87
CDCA4-201ENST00000336219 NETO2Q8NC67 525 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 RAB3IL1Q8TBN0 382 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 NDNQ99608 321 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 RBPJLQ9UBG7 517 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 CDH22Q9UJ99 828 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 APOBEC2Q9Y235 224 aaKnown RBP20.48■□□□□ 0.87
CDCA4-201ENST00000336219 PCNTO95613 3336 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 WDR27A2RRH5 827 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 ADCY6O43306 1168 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 ALDOAP04075 364 aaKnown RBP20.48■□□□□ 0.87
CDCA4-201ENST00000336219 NCF2P19878 526 aaPredicted RBP20.48■□□□□ 0.87
CDCA4-201ENST00000336219 IDH3AP50213 366 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 MED21Q13503 144 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 TRIP10Q15642 601 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 DPYSL2Q16555 572 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 PPM1JQ5JR12 505 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 C10orf107Q8IVU9 208 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 DEFB107AQ8IZN7 70 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 PHTF2Q8N3S3 785 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 OTUD5Q96G74 571 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 PGLYRP2Q96PD5 576 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 KLHL4Q9C0H6 718 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 TBC1D30Q9Y2I9 924 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 NME7Q9Y5B8 376 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 PCDHA11Q9Y5I1 949 aa20.48■□□□□ 0.87
CDCA4-201ENST00000336219 CCNT2O60583 730 aaKnown RBP20.47■□□□□ 0.87
CDCA4-201ENST00000336219 TSPAN1O60635 241 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 UQCRBP14927 111 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 RAG1P15918 1043 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 VCLP18206 1134 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 CDK18Q07002 472 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 PDE1CQ14123 709 aaPredicted RBP20.47■□□□□ 0.87
CDCA4-201ENST00000336219 AAGABQ6PD74 315 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 ARCQ7LC44 396 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 OXCT2Q9BYC2 517 aaPredicted RBP20.47■□□□□ 0.87
CDCA4-201ENST00000336219 LGALS2P05162 132 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 SERPINB9P50453 376 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 PCLAFQ15004 111 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 ARMC3Q5W041 872 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 CASC4Q6P4E1 433 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 FRMD7Q6ZUT3 714 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 B4GALNT2Q8NHY0 566 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 TFB1MQ8WVM0 346 aaKnown RBP20.47■□□□□ 0.87
CDCA4-201ENST00000336219 NCSTNQ92542 709 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 EZH1Q92800 747 aaPredicted RBP20.47■□□□□ 0.87
CDCA4-201ENST00000336219 SORT1Q99523 831 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 DHX35Q9H5Z1 703 aaKnown RBP20.47■□□□□ 0.87
CDCA4-201ENST00000336219 ELP3Q9H9T3 547 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 MAN1C1Q9NR34 630 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 ZNF358Q9NW07 568 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 HESX1Q9UBX0 185 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 POMPQ9Y244 141 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 PSAT1Q9Y617 370 aa20.47■□□□□ 0.87
CDCA4-201ENST00000336219 PGM3O95394 542 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 ITGAXP20702 1163 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 NR2C2P49116 596 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 ATXN1P54253 815 aaKnown RBP20.46■□□□□ 0.87
CDCA4-201ENST00000336219 ARHGAP1Q07960 439 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 GJC2Q5T442 439 aaPredicted RBP20.46■□□□□ 0.87
CDCA4-201ENST00000336219 PDPK2PQ6A1A2 396 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 KCNT2Q6UVM3 1135 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 ARHGAP22Q7Z5H3 698 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 QKIQ96PU8 341 aaKnown RBP eCLIP20.46■□□□□ 0.87
CDCA4-201ENST00000336219 C11orf84Q9BUA3 381 aaPredicted RBP20.46■□□□□ 0.87
CDCA4-201ENST00000336219 ZDHHC7Q9NXF8 308 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 MFHAS1Q9Y4C4 1052 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 SNX9Q9Y5X1 595 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 PRKCGP05129 697 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 ZFXP17010 805 aaPredicted RBP20.46■□□□□ 0.87
CDCA4-201ENST00000336219 PTPN9P43378 593 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 DYNC1I2Q13409 638 aaKnown RBP20.46■□□□□ 0.87
CDCA4-201ENST00000336219 SEMA5AQ13591 1074 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 MMEL1Q495T6 779 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 TIFABQ6ZNK6 161 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 ADGRG6Q86SQ4 1221 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 ZDHHC17Q8IUH5 632 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 ARHGAP18Q8N392 663 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 MOCS1Q9NZB8 636 aa20.46■□□□□ 0.87
CDCA4-201ENST00000336219 TOMM70O94826 608 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 PGM2L1Q6PCE3 622 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 NAT14Q8WUY8 206 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 NLRP7Q8WX94 980 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 NMD3Q96D46 503 aaKnown RBP20.45■□□□□ 0.86
CDCA4-201ENST00000336219 GCNAQ96QF7 691 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms