RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 AQP5P55064 265 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 ADAM17P78536 824 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 NIPAL4Q0D2K0 466 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 WASHC5Q12768 1159 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 KRT72Q14CN4 511 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 PACS1Q6VY07 963 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 PAQR9Q6ZVX9 377 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 RASSF3Q86WH2 238 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 FBXO41Q8TF61 875 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 TSPAN18Q96SJ8 248 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 PTPN18Q99952 460 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 WWP1Q9H0M0 922 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 CXorf56Q9H5V9 222 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 XPNPEP3Q9NQH7 507 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 CPA4Q9UI42 421 aa18.21■□□□□ 0.51
LRCH3-201ENST00000334859 HBS1LQ9Y450 684 aaKnown RBP18.21■□□□□ 0.51
LRCH3-201ENST00000334859 IQCA1LA6NCM1 817 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 PTGESO14684 152 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 BIRC5O15392 142 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 ALDOAP04075 364 aaKnown RBP18.2■□□□□ 0.5
LRCH3-201ENST00000334859 RARBP10826 455 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 IGFBP6P24592 240 aaPredicted RBP18.2■□□□□ 0.5
LRCH3-201ENST00000334859 CRYBB1P53674 252 aaPredicted RBP18.2■□□□□ 0.5
LRCH3-201ENST00000334859 DPYSQ14117 519 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 C16orf46Q6P387 395 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 TIFABQ6ZNK6 161 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 RINLQ6ZS11 566 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.2■□□□□ 0.5
LRCH3-201ENST00000334859 NT5C3BQ969T7 300 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 SYT17Q9BSW7 474 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 ULBP1Q9BZM6 244 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 PRDM16Q9HAZ2 1276 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 KLHL8Q9P2G9 620 aaPredicted RBP18.2■□□□□ 0.5
LRCH3-201ENST00000334859 TXNDC16Q9P2K2 825 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 PSAT1Q9Y617 370 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 SF3B1O75533 1304 aaKnown RBP eCLIP18.2■□□□□ 0.51e-6■■■■■ 95.6
LRCH3-201ENST00000334859 GLTPD2A6NH11 291 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 TPBGLP0DKB5 382 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 STX3Q13277 289 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 CES3Q6UWW8 571 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 C4orf50Q6ZRC1 276 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 CYS1Q717R9 158 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 RNF169Q8NCN4 708 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 RAB3IL1Q8TBN0 382 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 ARNTL2Q8WYA1 636 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 ATP2A3Q93084 1043 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 SLC2A13Q96QE2 648 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 DDX43Q9NXZ2 648 aaKnown RBP18.2■□□□□ 0.5
LRCH3-201ENST00000334859 FLRT1Q9NZU1 646 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 ZFATQ9P243 1243 aa18.2■□□□□ 0.5
LRCH3-201ENST00000334859 RPL26L1Q9UNX3 145 aaKnown RBP18.2■□□□□ 0.5
LRCH3-201ENST00000334859 C17orf102A2RUQ5 167 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 UNCXA6NJT0 531 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 NRP1O14786 923 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 GSC2O15499 205 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 CPA2P48052 419 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 CPT1AP50416 773 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 PDE1BQ01064 536 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 OLIG2Q13516 323 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 RCN2Q14257 317 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 NAA25Q14CX7 972 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 FASTKD1Q53R41 847 aaKnown RBP18.19■□□□□ 0.5
LRCH3-201ENST00000334859 N4BP2L1Q5TBK1 243 aaPredicted RBP18.19■□□□□ 0.5
LRCH3-201ENST00000334859 KIAA0319Q5VV43 1072 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 KYAT3Q6YP21 454 aaKnown RBP18.19■□□□□ 0.5
LRCH3-201ENST00000334859 PID1Q7Z2X4 250 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 CCNJLQ8IV13 435 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 KCTD13Q8WZ19 329 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 AGAP3Q96P47 875 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 C20orf27Q9GZN8 174 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 DOCK3Q8IZD9 2030 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 FAM72CH0Y354 149 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 SNNO75324 88 aaPredicted RBP18.19■□□□□ 0.5
LRCH3-201ENST00000334859 ENO1P06733 434 aaKnown RBP18.19■□□□□ 0.5
LRCH3-201ENST00000334859 RPL10AP62906 217 aaKnown RBP18.19■□□□□ 0.5
LRCH3-201ENST00000334859 PAFAH1B3Q15102 231 aaKnown RBP18.19■□□□□ 0.5
LRCH3-201ENST00000334859 FAM72AQ5TYM5 149 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 FAM72DQ6L9T8 149 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 DSTYKQ6XUX3 929 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 BNIPLQ7Z465 357 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 FAM72BQ86X60 149 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 SMC1BQ8NDV3 1235 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 RILPQ96NA2 401 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 PGLYRP2Q96PD5 576 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 NAT9Q9BTE0 207 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 RPS6KL1Q9Y6S9 549 aa18.19■□□□□ 0.5
LRCH3-201ENST00000334859 YJEFN3A6XGL0 299 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 MEIS3P2A8K0S8 358 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 E7ENQ6 273 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 GLRA3O75311 464 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 USP12O75317 370 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 AP1G2O75843 785 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 POLBP06746 335 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 ITGA2BP08514 1039 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 ERVK-10P10266 1014 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 GNAZP19086 355 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 LRPAP1P30533 357 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 MLH1P40692 756 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 TPI1P60174 286 aa18.18■□□□□ 0.5
LRCH3-201ENST00000334859 PDE1CQ14123 709 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms