RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 AP1G1O43747 822 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 TCN1P20061 433 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 GRK2P25098 689 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 ZNF280AP59817 542 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 KLF10Q13118 480 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 PDK1Q15118 436 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 TAZQ16635 292 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 PLD5Q8N7P1 536 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 FNIP1Q8TF40 1166 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 SLC7A3Q8WY07 619 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 CDKL2Q92772 493 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 USP13Q92995 863 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 RNF157Q96PX1 679 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 PEBP4Q96S96 227 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 APOL1O14791 398 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 XPO1O14980 1071 aaKnown RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 NR3C2P08235 984 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 MYL4P12829 197 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 ENO3P13929 434 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 PTPRAP18433 802 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 SESN2P58004 480 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 ABCE1P61221 599 aaKnown RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 PDE1CQ14123 709 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 OR6B2Q6IFH4 312 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 XYLT1Q86Y38 959 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 TNS4Q8IZW8 715 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 SDCBP2Q9H190 292 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 DHX33Q9H6R0 707 aaKnown RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 COG4Q9H9E3 785 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 JPH1Q9HDC5 661 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 TIMMDC1Q9NPL8 285 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 FAM159BA6NKW6 160 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 RPL26P61254 145 aaKnown RBP14.09□□□□□ -0.15
SYNE3-201ENST00000334258 MYBPC1Q00872 1141 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 FSTL1Q12841 308 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 SNX32Q86XE0 403 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 DDI1Q8WTU0 396 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 OTUD5Q96G74 571 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 NLRP4Q96MN2 994 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 CCT7Q99832 543 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 NACA2Q9H009 215 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 LIN28AQ9H9Z2 209 aaKnown RBP14.09□□□□□ -0.15
SYNE3-201ENST00000334258 PCDHGC3Q9UN70 934 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 WDR27A2RRH5 827 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 M0QYV0 167 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 ZBTB14O43829 449 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 ALOX15P16050 662 aaPredicted RBP14.09□□□□□ -0.15
SYNE3-201ENST00000334258 NELFEP18615 380 aaKnown RBP14.09□□□□□ -0.15
SYNE3-201ENST00000334258 ADORA2AP29274 412 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 L1CAMP32004 1257 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 NR1H2P55055 460 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 ACTR2P61160 394 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 RDM1Q8NG50 284 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 UBA3Q8TBC4 463 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 GAB3Q8WWW8 586 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 LRRC39Q96DD0 335 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 HSPBAP1Q96EW2 488 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 SYT17Q9BSW7 474 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 ZNF358Q9NW07 568 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 DNAJC28Q9NX36 388 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 DCDC2Q9UHG0 476 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 EMCNQ9ULC0 261 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 RAB26Q9ULW5 256 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 METTL18O95568 372 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 SLC5A2P31639 672 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 PCLAFQ15004 111 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 NRF1Q16656 503 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 XKR3Q5GH77 459 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 LRRC8BQ6P9F7 803 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 AHI1Q8N157 1196 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 MTMR14Q8NCE2 650 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 ZNF280CQ8ND82 737 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 CATSPER1Q8NEC5 780 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 RXFP2Q8WXD0 754 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 SIGLEC10Q96LC7 697 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 CORO1BQ9BR76 489 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 BRD8Q9H0E9 1235 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 ELP3Q9H9T3 547 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 SPON1Q9HCB6 807 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 XPNPEP3Q9NQH7 507 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 TMEM216Q9P0N5 145 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 STK39Q9UEW8 545 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 STYXL1Q9Y6J8 313 aa14.09□□□□□ -0.15
SYNE3-201ENST00000334258 PLA2G6O60733 806 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 E2F6O75461 281 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 ALDOAP04075 364 aaKnown RBP14.08□□□□□ -0.16
SYNE3-201ENST00000334258 CPA3P15088 417 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 MX2P20592 715 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 CCND2P30279 289 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 BACE1P56817 501 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 TREML2Q5T2D2 321 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 NXNQ6DKJ4 435 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 KYQ8NBH2 561 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 BHLHE22Q8NFJ8 381 aaPredicted RBP14.08□□□□□ -0.16
SYNE3-201ENST00000334258 SLC35B4Q969S0 331 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 EME1Q96AY2 570 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 PDLIM7Q9NR12 457 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 BCAP29Q9UHQ4 241 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 TDRKHQ9Y2W6 561 aaKnown RBP14.08□□□□□ -0.16
SYNE3-201ENST00000334258 XRCC1P18887 633 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms