RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 POTEAQ6S8J7 498 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 PQLC1Q8N2U9 271 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 DGCR14Q96DF8 476 aaKnown RBP24.26■■□□□ 1.47
TSKU-201ENST00000333090 CDT1Q9H211 546 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 DHX35Q9H5Z1 703 aaKnown RBP24.26■■□□□ 1.47
TSKU-201ENST00000333090 NDUFA13Q9P0J0 144 aa24.26■■□□□ 1.47
TSKU-201ENST00000333090 TNS1Q9HBL0 1735 aaKnown RBP24.25■■□□□ 1.47
TSKU-201ENST00000333090 TTLL12Q14166 644 aaPredicted RBP24.25■■□□□ 1.47
TSKU-201ENST00000333090 CNGA3Q16281 694 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 FSCBQ5H9T9 825 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 RBM44Q6ZP01 1051 aaKnown RBP24.25■■□□□ 1.47
TSKU-201ENST00000333090 TRIM50Q86XT4 487 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 TXNDC16Q9P2K2 825 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 LACTBL1A8MY62 500 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 CLPTM1O96005 669 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 TFE3P19532 575 aaPredicted RBP24.25■■□□□ 1.47
TSKU-201ENST00000333090 RGS2P41220 211 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 KLF10Q13118 480 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 STEAP4Q687X5 459 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 CYS1Q717R9 158 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 SCUBE3Q8IX30 993 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 ZNF781Q8N8C0 355 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 PRICKLE1Q96MT3 831 aaPredicted RBP24.25■■□□□ 1.47
TSKU-201ENST00000333090 TBCBQ99426 244 aa24.25■■□□□ 1.47
TSKU-201ENST00000333090 GBA2Q9HCG7 927 aaPredicted RBP24.25■■□□□ 1.47
TSKU-201ENST00000333090 MGAMO43451 1857 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 NFKBIEO00221 500 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 ACKR2O00590 384 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 AIM2O14862 343 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 AP1G1O43747 822 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 CPA3P15088 417 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 MGAT1P26572 445 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 HARS2P49590 506 aaKnown RBP24.24■■□□□ 1.47
TSKU-201ENST00000333090 SLC9B1Q4ZJI4 515 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 CMC1Q7Z7K0 106 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 PGBD4Q96DM1 585 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 DNAJC1Q96KC8 554 aaKnown RBP24.24■■□□□ 1.47
TSKU-201ENST00000333090 PCDHGB4Q9UN71 923 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 PSMD13Q9UNM6 376 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 PHF24Q9UPV7 400 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 PCDHGB5Q9Y5G0 923 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 ASLP04424 464 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 CD1EP15812 388 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 SERPINB5P36952 375 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 HDAC4P56524 1084 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 RPL26P61254 145 aaKnown RBP24.24■■□□□ 1.47
TSKU-201ENST00000333090 ATXN7L3BQ96GX2 97 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 LENG8Q96PV6 779 aaPredicted RBP24.24■■□□□ 1.47
TSKU-201ENST00000333090 EPB41L1Q9H4G0 881 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 UBAP1Q9NZ09 502 aa24.24■■□□□ 1.47
TSKU-201ENST00000333090 MDM4O15151 490 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 IL18RAPO95256 599 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 HSPA4LO95757 839 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 TFAP2AP05549 437 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 MX2P20592 715 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 RPL5P46777 297 aaKnown RBP24.23■■□□□ 1.47
TSKU-201ENST00000333090 NUDT2P50583 147 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 ATXN1P54253 815 aaKnown RBP24.23■■□□□ 1.47
TSKU-201ENST00000333090 PMF1Q6P1K2 205 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 CES3Q6UWW8 571 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 ZNF280CQ8ND82 737 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 C2orf40Q9H1Z8 148 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 SSX2IPQ9Y2D8 614 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 PDLIM1O00151 329 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 ATP9BO43861 1147 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 DNAJA2O60884 412 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 PFKMP08237 780 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 ATP6V1B1P15313 513 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 OLFML1Q6UWY5 402 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 EEPD1Q7L9B9 569 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 MARVELD2Q8N4S9 558 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 HPDLQ96IR7 371 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 RTKNQ9BST9 563 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 PIM2Q9P1W9 311 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 LZTS1Q9Y250 596 aa24.23■■□□□ 1.47
TSKU-201ENST00000333090 ERVK-10P10266 1014 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 GOLGA7BQ2TAP0 167 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 LCLAT1Q6UWP7 414 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 MAPK15Q8TD08 544 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 QKIQ96PU8 341 aaKnown RBP eCLIP24.22■■□□□ 1.47
TSKU-201ENST00000333090 CYP3A43Q9HB55 503 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 C6orf203Q9P0P8 240 aaPredicted RBP24.22■■□□□ 1.47
TSKU-201ENST00000333090 TMCO1Q9UM00 188 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 BARX2Q9UMQ3 279 aaPredicted RBP24.22■■□□□ 1.47
TSKU-201ENST00000333090 ADAMTS5Q9UNA0 930 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 MFHAS1Q9Y4C4 1052 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 CDY2AQ9Y6F7 541 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 CDY1Q9Y6F8 540 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 VILLO15195 856 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 P4HA1P13674 534 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 ACAT1P24752 427 aaKnown RBP24.22■■□□□ 1.47
TSKU-201ENST00000333090 INHBCP55103 352 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 MRPS22P82650 360 aaKnown RBP24.22■■□□□ 1.47
TSKU-201ENST00000333090 TRAPPC12Q8WVT3 735 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 CNBD2Q96M20 576 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 B3GNT5Q9BYG0 378 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 Q9H521 79 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 PTTG2Q9NZH5 202 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 APPL1Q9UKG1 709 aa24.22■■□□□ 1.47
TSKU-201ENST00000333090 GOLGA8QA0A0J9YX86 632 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms