RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 STN1Q9H668 368 aaKnown RBP15.8■□□□□ 0.12
BRCC3-201ENST00000330045 PIH1D1Q9NWS0 290 aaKnown RBP15.8■□□□□ 0.12
BRCC3-201ENST00000330045 SNTG2Q9NY99 539 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 TUBGCP4Q9UGJ1 667 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 SCOCQ9UIL1 159 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 SOX13Q9UN79 622 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 USP3Q9Y6I4 520 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 PLXNB2O15031 1838 aa15.8■□□□□ 0.12
BRCC3-201ENST00000330045 HCRTO43612 131 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 CCDC130P13994 396 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 MGAT1P26572 445 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 BCAT1P54687 386 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 AP2B1P63010 937 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 TUBB3Q13509 450 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 DCAF4L1Q3SXM0 396 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 GPR142Q7Z601 462 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 ANKRD23Q86SG2 305 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 CCNJLQ8IV13 435 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 KBTBD2Q8IY47 623 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 ARNTL2Q8WYA1 636 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.79■□□□□ 0.12
BRCC3-201ENST00000330045 APOBEC2Q9Y235 224 aaKnown RBP15.79■□□□□ 0.12
BRCC3-201ENST00000330045 DOCK3Q8IZD9 2030 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 COL1A2P08123 1366 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 PDGFRBP09619 1106 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 C6orf222P0C671 652 aaPredicted RBP15.79■□□□□ 0.12
BRCC3-201ENST00000330045 PGAM1P18669 254 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 CPOXP36551 454 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 ERFP50548 548 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 IRX1P78414 480 aaPredicted RBP15.79■□□□□ 0.12
BRCC3-201ENST00000330045 PDE1BQ01064 536 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 STRADAQ7RTN6 431 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 LRRC52Q8N7C0 313 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 BEST2Q8NFU1 509 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 DNAJB4Q9UDY4 337 aa15.79■□□□□ 0.12
BRCC3-201ENST00000330045 RALGAPA2Q2PPJ7 1873 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 ADCY6O43306 1168 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 STK10O94804 968 aaKnown RBP15.78■□□□□ 0.12
BRCC3-201ENST00000330045 KLHL2O95198 593 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 SNAI1O95863 264 aaPredicted RBP15.78■□□□□ 0.12
BRCC3-201ENST00000330045 SERPINE1P05121 402 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 ITGA2BP08514 1039 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 NAB1Q13506 487 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 PCLAFQ15004 111 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 ZBTB6Q15916 424 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 BSPRYQ5W0U4 402 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 NAIF1Q69YI7 327 aaPredicted RBP15.78■□□□□ 0.12
BRCC3-201ENST00000330045 FAM131BQ86XD5 332 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 C18orf25Q96B23 403 aaPredicted RBP15.78■□□□□ 0.12
BRCC3-201ENST00000330045 GPAMQ9HCL2 828 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 EIF2B3Q9NR50 452 aaKnown RBP15.78■□□□□ 0.12
BRCC3-201ENST00000330045 FZD10Q9ULW2 581 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 PSAT1Q9Y617 370 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 MEI4A8MW99 385 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 RNF103O00237 685 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 MFSD11O43934 449 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 OPHN1O60890 802 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 ACADSBP45954 432 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 RPL34P49207 117 aaKnown RBP15.78■□□□□ 0.12
BRCC3-201ENST00000330045 HIC1Q14526 733 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 RABGAP1LQ5R372 815 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 C10orf107Q8IVU9 208 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 PPTC7Q8NI37 304 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 NPLOC4Q8TAT6 608 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 PPP4R1Q8TF05 950 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 P2RY11Q96G91 374 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 SNX27Q96L92 541 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 TTC1Q99614 292 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 C16orf70Q9BSU1 422 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 NAT9Q9BTE0 207 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 KATNBL1Q9H079 304 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 NDE1Q9NXR1 346 aa15.78■□□□□ 0.12
BRCC3-201ENST00000330045 A0A088AWK7 358 aa15.77■□□□□ 0.12
BRCC3-201ENST00000330045 FKBP1BP68106 108 aa15.77■□□□□ 0.12
BRCC3-201ENST00000330045 INSCQ1MX18 579 aa15.77■□□□□ 0.12
BRCC3-201ENST00000330045 GLRA4Q5JXX5 417 aa15.77■□□□□ 0.12
BRCC3-201ENST00000330045 PRAMEF19Q5SWL8 479 aa15.77■□□□□ 0.12
BRCC3-201ENST00000330045 NETO2Q8NC67 525 aa15.77■□□□□ 0.12
BRCC3-201ENST00000330045 GATA6Q92908 595 aa15.77■□□□□ 0.12
BRCC3-201ENST00000330045 FERMT1Q9BQL6 677 aa15.77■□□□□ 0.12
BRCC3-201ENST00000330045 TXNDC16Q9P2K2 825 aa15.77■□□□□ 0.12
BRCC3-201ENST00000330045 RCOR3Q9P2K3 495 aaPredicted RBP15.77■□□□□ 0.12
BRCC3-201ENST00000330045 MAGEA13PA6NCF6 341 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 ENO4A6NNW6 628 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 H3BRB1 525 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 BAG2O95816 211 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 PROCP04070 461 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 GRK2P25098 689 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 MATKP42679 507 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 CCNA1P78396 465 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 SLC25A3Q00325 362 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 TMCO4Q5TGY1 634 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 OR52E8Q6IFG1 317 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 ZNF410Q86VK4 478 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 CRYBG2Q8N1P7 616 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 SLC25A41Q8N5S1 370 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 CEP41Q9BYV8 373 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 FAM96AQ9H5X1 160 aa15.77■□□□□ 0.11
BRCC3-201ENST00000330045 TUT1Q9H6E5 874 aaKnown RBP15.77■□□□□ 0.11
BRCC3-201ENST00000330045 SYBUQ9NX95 663 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms