RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 HP1BP3Q5SSJ5 553 aaPredicted RBP20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 SPOUT1Q5T280 376 aaKnown RBP20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 MFSD5Q6N075 450 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 BZW1Q7L1Q6 419 aaKnown RBP20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 NECAB2Q7Z6G3 386 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 TP53INP2Q8IXH6 220 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 TFB1MQ8WVM0 346 aaKnown RBP20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 MTRRQ9UBK8 725 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 LTBP2Q14767 1821 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 FAM92AA1XBS5 289 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 KIAA0355O15063 1070 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 ACRP10323 421 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 RAG1P15918 1043 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 YWHAQP27348 245 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 AUHQ13825 339 aaKnown RBP20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 SELENOSQ9BQE4 189 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 ROPN1BQ9BZX4 212 aaPredicted RBP20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 CCDC134Q9H6E4 229 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 ROPN1Q9HAT0 212 aaPredicted RBP20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 RAB6BQ9NRW1 208 aa20.9■□□□□ 0.94
RIPPLY3-201ENST00000329553 PLXNA3P51805 1871 aa20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 WDR27A2RRH5 827 aa20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 HACD1B0YJ81 288 aa20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 RASGRF2O14827 1237 aa20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 ALOX15BO15296 676 aa20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 LRIG2O94898 1065 aa20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 VAV1P15498 845 aa20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 PSMD5Q16401 504 aa20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 HIF1AQ16665 826 aa20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 LACTB2Q53H82 288 aaPredicted RBP20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 FNBP1LQ5T0N5 605 aa20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 SLC8B1Q6J4K2 584 aa20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 STMN4Q9H169 189 aaPredicted RBP20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 OSBPL2Q9H1P3 480 aa20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 RC3H2Q9HBD1 1191 aaKnown RBP20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 XPO7Q9UIA9 1087 aaKnown RBP20.89■□□□□ 0.94
RIPPLY3-201ENST00000329553 SMIM23A6NLE4 172 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 C2CD2LO14523 706 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 BANF1O75531 89 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 GCATO75600 419 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 OR1D2P34982 312 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 WDR5P61964 334 aaKnown RBP20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 PDIA2Q13087 525 aaKnown RBP20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 KCNJ11Q14654 390 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 BRMS1LQ5PSV4 323 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 SYCP2LQ5T4T6 812 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 HEATR6Q6AI08 1181 aaKnown RBP20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 CENPUQ71F23 418 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 C2orf15Q8WU43 125 aaKnown RBP20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 FBXO32Q969P5 355 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 SPATA17Q96L03 361 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 EPAS1Q99814 870 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 SIK2Q9H0K1 926 aa20.89■□□□□ 0.93
RIPPLY3-201ENST00000329553 CCR1P32246 355 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 SPRED3Q2MJR0 410 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 MSS51Q4VC12 460 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 FAXCQ5TGI0 409 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 KIAA1841Q6NSI8 718 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 ARHGAP18Q8N392 663 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 GIPC2Q8TF65 315 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 HTR3CQ8WXA8 447 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 PRDM12Q9H4Q4 367 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 BACE2Q9Y5Z0 518 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 GOLGA6L7A0A1B0GV03 622 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 SMAPO00193 183 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 RASSF9O75901 435 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 RTN3O95197 1032 aaPredicted RBP20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 EPHB2P29323 1055 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 SLCO1A2P46721 670 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 ZNF135P52742 658 aaPredicted RBP20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 TAF10Q12962 218 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 RASIP1Q5U651 963 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 ZBED8Q8IZ13 594 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 CCT6BQ92526 530 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 HAPLN3Q96S86 360 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 ETNK1Q9HBU6 452 aa20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.88■□□□□ 0.93
RIPPLY3-201ENST00000329553 GREB1Q4ZG55 1949 aa20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 CHADO15335 359 aa20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 PAGE1O75459 146 aa20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 METTL18O95568 372 aa20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 ARL4CP56559 192 aa20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 AP1B1Q10567 949 aa20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 PPP2R5DQ14738 602 aa20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 PDK1Q15118 436 aa20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 PRKD1Q15139 912 aaPredicted RBP20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 LONRF1Q17RB8 773 aa20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 MSANTD2Q6P1R3 559 aa20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 ZNF558Q96NG5 402 aa20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 CLSTN3Q9BQT9 956 aa20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 INTS9Q9NV88 658 aaKnown RBP20.87■□□□□ 0.93
RIPPLY3-201ENST00000329553 SRGAP2BP0DMP2 458 aa20.86■□□□□ 0.93
RIPPLY3-201ENST00000329553 RPL10AP62906 217 aaKnown RBP20.86■□□□□ 0.93
RIPPLY3-201ENST00000329553 MTM1Q13496 603 aa20.86■□□□□ 0.93
RIPPLY3-201ENST00000329553 BTG3Q14201 252 aaPredicted RBP20.86■□□□□ 0.93
RIPPLY3-201ENST00000329553 PIGWQ7Z7B1 504 aa20.86■□□□□ 0.93
RIPPLY3-201ENST00000329553 SLC39A11Q8N1S5 342 aa20.86■□□□□ 0.93
RIPPLY3-201ENST00000329553 TMEM199Q8N511 208 aa20.86■□□□□ 0.93
RIPPLY3-201ENST00000329553 NPWQ8N729 165 aa20.86■□□□□ 0.93
RIPPLY3-201ENST00000329553 CCNYQ8ND76 341 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms