RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 GPR62Q9BZJ7 368 aa16.34■□□□□ 0.21
PGBD2-201ENST00000329291 SMYD2Q9NRG4 433 aa16.34■□□□□ 0.21
PGBD2-201ENST00000329291 OSER1Q9NX31 292 aa16.34■□□□□ 0.21
PGBD2-201ENST00000329291 SFMBT1Q9UHJ3 866 aa16.34■□□□□ 0.21
PGBD2-201ENST00000329291 MRPL42Q9Y6G3 142 aaKnown RBP16.34■□□□□ 0.21
PGBD2-201ENST00000329291 COL4A4P53420 1690 aaPredicted RBP16.33■□□□□ 0.21
PGBD2-201ENST00000329291 MSI1O43347 362 aaKnown RBP16.33■□□□□ 0.21
PGBD2-201ENST00000329291 TYROBPO43914 113 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 TADA2AO75478 443 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 KRT4P19013 534 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 ARL13BQ3SXY8 428 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 UNC5AQ6ZN44 842 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 C4orf50Q6ZRC1 276 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 TTC9BQ8N6N2 239 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 CASP10Q92851 521 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 RNF34Q969K3 372 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 CASD1Q96PB1 797 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 PGLYRP2Q96PD5 576 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 C12orf65Q9H3J6 166 aaKnown RBP16.33■□□□□ 0.21
PGBD2-201ENST00000329291 PPCSQ9HAB8 311 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 LRFN2Q9ULH4 789 aa16.33■□□□□ 0.21
PGBD2-201ENST00000329291 TRIM66O15016 1216 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 PRPF4O43172 522 aaKnown RBP eCLIP16.33■□□□□ 0.2
PGBD2-201ENST00000329291 ATP2A2P16615 1042 aaKnown RBP16.33■□□□□ 0.2
PGBD2-201ENST00000329291 PSMB4P28070 264 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 CORO7P57737 925 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 CRADDP78560 199 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 FAAP100Q0VG06 881 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 OLIG2Q13516 323 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 SLC1A5Q15758 541 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 VARS2Q5ST30 1063 aaKnown RBP16.33■□□□□ 0.2
PGBD2-201ENST00000329291 CEP57Q86XR8 500 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 GPR152Q8TDT2 470 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 SLC44A1Q8WWI5 657 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 ELAC2Q9BQ52 826 aaKnown RBP16.33■□□□□ 0.2
PGBD2-201ENST00000329291 GORASP1Q9BQQ3 440 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 FRMD8Q9BZ67 464 aaPredicted RBP16.33■□□□□ 0.2
PGBD2-201ENST00000329291 NKIRAS1Q9NYS0 192 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 PTPRDP23468 1912 aa16.33■□□□□ 0.2
PGBD2-201ENST00000329291 GOLGA8RI6L899 631 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 UGT1A9O60656 530 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 ASMTLO95671 621 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 SRGAP2BP0DMP2 458 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 EPHB2P29323 1055 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 PBX3P40426 434 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 USP46P62068 366 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 SPARCL1Q14515 664 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 GKAP1Q5VSY0 366 aaPredicted RBP16.32■□□□□ 0.2
PGBD2-201ENST00000329291 TRMT10BQ6PF06 316 aaKnown RBP16.32■□□□□ 0.2
PGBD2-201ENST00000329291 ATAD1Q8NBU5 361 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 SMC6Q96SB8 1091 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 EBNA1BP2Q99848 306 aaKnown RBP16.32■□□□□ 0.2
PGBD2-201ENST00000329291 PAIP2Q9BPZ3 127 aaKnown RBP16.32■□□□□ 0.2
PGBD2-201ENST00000329291 SIK2Q9H0K1 926 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 UGT1A7Q9HAW7 530 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 UGT1A10Q9HAW8 530 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 UGT1A8Q9HAW9 530 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 FGFR1OP2Q9NVK5 253 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 NEU3Q9UQ49 428 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 MAD1L1Q9Y6D9 718 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 TET1Q8NFU7 2136 aa16.32■□□□□ 0.2
PGBD2-201ENST00000329291 A0A1W2PQH9 124 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 MYO1CO00159 1063 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 OPHN1O60890 802 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 SOAT2O75908 522 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 PTPN3P26045 913 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 STX2P32856 288 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 ATN1P54259 1190 aaPredicted RBP16.31■□□□□ 0.2
PGBD2-201ENST00000329291 FAM171A1Q5VUB5 890 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 BTBD8Q5XKL5 378 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 UNC5BQ8IZJ1 945 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 CACNA2D3Q8IZS8 1091 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 CELF6Q96J87 481 aaKnown RBP16.31■□□□□ 0.2
PGBD2-201ENST00000329291 SERAC1Q96JX3 654 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 ABCC13Q9NSE7 274 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 ARHGEF38Q9NXL2 777 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 MYO18AQ92614 2054 aaKnown RBP16.31■□□□□ 0.2
PGBD2-201ENST00000329291 MKI67P46013 3256 aaKnown RBP16.31■□□□□ 0.2
PGBD2-201ENST00000329291 NT5C1B-RDH14C9J2C7 533 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 PPP1R12AO14974 1030 aaPredicted RBP16.31■□□□□ 0.2
PGBD2-201ENST00000329291 IRAK2O43187 625 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 TAC1P20366 129 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 FDFT1P37268 417 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 RSPO2Q6UXX9 243 aaPredicted RBP16.31■□□□□ 0.2
PGBD2-201ENST00000329291 BEND5Q7L4P6 421 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 PID1Q7Z2X4 250 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 CRIPAKQ8N1N5 446 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 HIPK3Q9H422 1215 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 MARCH5Q9NX47 278 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 GGA2Q9UJY4 613 aa16.31■□□□□ 0.2
PGBD2-201ENST00000329291 WDR27A2RRH5 827 aa16.3■□□□□ 0.2
PGBD2-201ENST00000329291 HOXA2O43364 376 aa16.3■□□□□ 0.2
PGBD2-201ENST00000329291 PARNO95453 639 aaKnown RBP16.3■□□□□ 0.2
PGBD2-201ENST00000329291 CA4P22748 312 aa16.3■□□□□ 0.2
PGBD2-201ENST00000329291 PPIDQ08752 370 aaKnown RBP16.3■□□□□ 0.2
PGBD2-201ENST00000329291 MRPL58Q14197 206 aaKnown RBP16.3■□□□□ 0.2
PGBD2-201ENST00000329291 SPRED3Q2MJR0 410 aa16.3■□□□□ 0.2
PGBD2-201ENST00000329291 PARP6Q2NL67 630 aa16.3■□□□□ 0.2
PGBD2-201ENST00000329291 SH2D5Q6ZV89 423 aa16.3■□□□□ 0.2
PGBD2-201ENST00000329291 TAS1R1Q7RTX1 841 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms