RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 GLT1D1Q96MS3 346 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 UMODL1Q5DID0 1318 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 CASTOR2A6NHX0 329 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 POMCP01189 267 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 ALBP02768 609 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 LYNP07948 512 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 CPB1P15086 417 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 OR1G1P47890 313 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 ADARP55265 1226 aaKnown RBP16.8■□□□□ 0.28
SFXN1-201ENST00000321442 ZC3H12AQ5D1E8 599 aaKnown RBP16.8■□□□□ 0.28
SFXN1-201ENST00000321442 OTUD3Q5T2D3 398 aaPredicted RBP16.8■□□□□ 0.28
SFXN1-201ENST00000321442 BTBD8Q5XKL5 378 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 CPT1BQ92523 772 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 BHMTQ93088 406 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 PNPOQ9NVS9 261 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 MAP3K20Q9NYL2 800 aaKnown RBP16.8■□□□□ 0.28
SFXN1-201ENST00000321442 AK5Q9Y6K8 562 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 MYH15Q9Y2K3 1946 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 SIGLEC16A6NMB1 481 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 PRPF4O43172 522 aaKnown RBP eCLIP16.8■□□□□ 0.282e-11■■■□□ 18.7
SFXN1-201ENST00000321442 TGFB3P10600 412 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 HOXD13P35453 343 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 RGS2P41220 211 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 CHN2P52757 468 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 ATP1A4Q13733 1029 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 LRRC38Q5VT99 294 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 EEF1DP3Q658K8 133 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 PHF13Q86YI8 300 aaPredicted RBP16.8■□□□□ 0.28
SFXN1-201ENST00000321442 GLIS1Q8NBF1 620 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 ABHD16BQ9H3Z7 469 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 VANGL2Q9ULK5 521 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 TSC22D4Q9Y3Q8 395 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 TRPC5OSA6NMA1 111 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 PEX11AO75192 247 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 MMP8P22894 467 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 CNTFP26441 200 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 ZNF280AP59817 542 aaPredicted RBP16.79■□□□□ 0.28
SFXN1-201ENST00000321442 RBBP7Q16576 425 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 HPS6Q86YV9 775 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 BHLHE22Q8NFJ8 381 aaPredicted RBP16.79■□□□□ 0.28
SFXN1-201ENST00000321442 CELF6Q96J87 481 aaKnown RBP16.79■□□□□ 0.28
SFXN1-201ENST00000321442 TINF2Q9BSI4 451 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 RNF103O00237 685 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 TMCC1O94876 653 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 CCDC15Q0P6D6 951 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 PEX6Q13608 980 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 ARHGEF6Q15052 776 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 SLC5A9Q2M3M2 681 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 RBM44Q6ZP01 1051 aaKnown RBP16.79■□□□□ 0.28
SFXN1-201ENST00000321442 SHCBP1Q8NEM2 672 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 TXNRD2Q9NNW7 524 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 CYLDQ9NQC7 956 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 DMAC2Q9NW81 257 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 NCKIPSDQ9NZQ3 722 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 CNTNAP1P78357 1384 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 MYO7AQ13402 2215 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 M0R3G1 203 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 HNRNPRO43390 633 aaKnown RBP16.79■□□□□ 0.28
SFXN1-201ENST00000321442 EPHA3P29320 983 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 ECHS1P30084 290 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 GPR142Q7Z601 462 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 CMC1Q7Z7K0 106 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 DDX28Q9NUL7 540 aaKnown RBP16.79■□□□□ 0.28
SFXN1-201ENST00000321442 PPME1Q9Y570 386 aa16.79■□□□□ 0.28
SFXN1-201ENST00000321442 NR5A2O00482 541 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 HOXD10P28358 340 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 ATICP31939 592 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 OAZ1P54368 228 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 TRIM16LQ309B1 348 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 KYAT3Q6YP21 454 aaKnown RBP16.78■□□□□ 0.28
SFXN1-201ENST00000321442 APBA2Q99767 749 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 CD48P09326 243 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 CAPSQ13938 189 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 NEDD8Q15843 81 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 NOTUMQ6P988 496 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 KIAA2013Q8IYS2 634 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 LENG9Q96B70 501 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 RMND5BQ96G75 393 aaPredicted RBP16.78■□□□□ 0.28
SFXN1-201ENST00000321442 SEPHS2Q99611 448 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 GORASP1Q9BQQ3 440 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 LGALS13Q9UHV8 139 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 C17orf102A2RUQ5 167 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 CCDC81Q6ZN84 652 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 MAB21L3Q8N8X9 362 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 NMRAL1Q9HBL8 299 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 DMAP1Q9NPF5 467 aaPredicted RBP16.78■□□□□ 0.28
SFXN1-201ENST00000321442 AFF4Q9UHB7 1163 aaKnown RBP16.78■□□□□ 0.28
SFXN1-201ENST00000321442 TELO2Q9Y4R8 837 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 TRDMT1O14717 391 aaKnown RBP16.78■□□□□ 0.28
SFXN1-201ENST00000321442 CST3P01034 146 aaPredicted RBP16.78■□□□□ 0.28
SFXN1-201ENST00000321442 HSPA1AP0DMV8 641 aaKnown RBP16.78■□□□□ 0.28
SFXN1-201ENST00000321442 HSPA1BP0DMV9 641 aaKnown RBP16.78■□□□□ 0.28
SFXN1-201ENST00000321442 ELNP15502 786 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 PSMA4P25789 261 aaKnown RBP16.78■□□□□ 0.28
SFXN1-201ENST00000321442 ETFBP38117 255 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 VWA5B1Q5TIE3 1220 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 TAS2R42Q7RTR8 314 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 TMC7Q7Z402 723 aa16.78■□□□□ 0.28
SFXN1-201ENST00000321442 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.78■□□□□ 0.28
SFXN1-201ENST00000321442 RUBCNLQ9H714 662 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms