RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 MAGEA3P43357 314 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 MAGEA11P43364 429 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 MNX1P50219 401 aaPredicted RBP17.5■□□□□ 0.39
SSR4-201ENST00000320857 SLC18A1P54219 525 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 PARP6Q2NL67 630 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 CTXN3Q4LDR2 81 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 ZNF280DQ6N043 979 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 COLGALT1Q8NBJ5 622 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 MRRFQ96E11 262 aaKnown RBP17.5■□□□□ 0.39
SSR4-201ENST00000320857 CFAP36Q96G28 342 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 SGSM3Q96HU1 749 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 TOX2Q96NM4 488 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 NSRP1Q9H0G5 558 aaKnown RBP17.5■□□□□ 0.39
SSR4-201ENST00000320857 SMOC2Q9H3U7 446 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 ARHGEF38Q9NXL2 777 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 SEPT10Q9P0V9 454 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 ZC3H7BQ9UGR2 993 aaKnown RBP17.5■□□□□ 0.39
SSR4-201ENST00000320857 IKBKGQ9Y6K9 419 aa17.5■□□□□ 0.39
SSR4-201ENST00000320857 TCRBV9S1A1TA0A576 114 aa17.49■□□□□ 0.39
SSR4-201ENST00000320857 TRDMT1O14717 391 aaKnown RBP17.49■□□□□ 0.39
SSR4-201ENST00000320857 PRPF4O43172 522 aaKnown RBP eCLIP17.49■□□□□ 0.39
SSR4-201ENST00000320857 MLNP12872 115 aa17.49■□□□□ 0.39
SSR4-201ENST00000320857 GBP2P32456 591 aaPredicted RBP17.49■□□□□ 0.39
SSR4-201ENST00000320857 HTR7P34969 479 aa17.49■□□□□ 0.39
SSR4-201ENST00000320857 IFNAR2P48551 515 aa17.49■□□□□ 0.39
SSR4-201ENST00000320857 EFTUD2Q15029 972 aaKnown RBP eCLIP17.49■□□□□ 0.393e-6■■■■■ 41.9
SSR4-201ENST00000320857 TCTN1Q2MV58 587 aa17.49■□□□□ 0.39
SSR4-201ENST00000320857 FAM171A1Q5VUB5 890 aa17.49■□□□□ 0.39
SSR4-201ENST00000320857 TAX1BP1Q86VP1 789 aa17.49■□□□□ 0.39
SSR4-201ENST00000320857 NUP93Q8N1F7 819 aa17.49■□□□□ 0.39
SSR4-201ENST00000320857 ARHGAP18Q8N392 663 aa17.49■□□□□ 0.39
SSR4-201ENST00000320857 HAPLN3Q96S86 360 aa17.49■□□□□ 0.39
SSR4-201ENST00000320857 MRPL9Q9BYD2 267 aaKnown RBP17.49■□□□□ 0.39
SSR4-201ENST00000320857 FBXO44Q9H4M3 255 aa17.49■□□□□ 0.39
SSR4-201ENST00000320857 SCML2Q9UQR0 700 aa17.49■□□□□ 0.39
SSR4-201ENST00000320857 KIAA0100Q14667 2235 aaKnown RBP17.49■□□□□ 0.39
SSR4-201ENST00000320857 NLRC5Q86WI3 1866 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 EPHB2P29323 1055 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 ATN1P54259 1190 aaPredicted RBP17.48■□□□□ 0.39
SSR4-201ENST00000320857 PPIDQ08752 370 aaKnown RBP17.48■□□□□ 0.39
SSR4-201ENST00000320857 ELAVL2Q12926 359 aaKnown RBP17.48■□□□□ 0.39
SSR4-201ENST00000320857 EIF4EBP2Q13542 120 aaPredicted RBP17.48■□□□□ 0.39
SSR4-201ENST00000320857 MRPL58Q14197 206 aaKnown RBP17.48■□□□□ 0.39
SSR4-201ENST00000320857 LRRC14Q15048 493 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 FAM182AQ5T1J6 154 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 GKAP1Q5VSY0 366 aaPredicted RBP17.48■□□□□ 0.39
SSR4-201ENST00000320857 NPAS4Q8IUM7 802 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 CRIPAKQ8N1N5 446 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 DCAKDQ8WVC6 231 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 CKAP2Q8WWK9 683 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 PAWRQ96IZ0 340 aaKnown RBP17.48■□□□□ 0.39
SSR4-201ENST00000320857 TMEM175Q9BSA9 504 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 HIPK3Q9H422 1215 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 SSU72Q9NP77 194 aaKnown RBP17.48■□□□□ 0.39
SSR4-201ENST00000320857 IGSF9Q9P2J2 1179 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 PTPRDP23468 1912 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 TTC3P53804 2025 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 TET1Q8NFU7 2136 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 PATJQ8NI35 1801 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 IQANK1A0A1B0GTG1 560 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 LRIG2O94898 1065 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 AMHP03971 560 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 VIMP08670 466 aaKnown RBP17.48■□□□□ 0.39
SSR4-201ENST00000320857 FGFR3P22607 806 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 CCR1P32246 355 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 COG7P83436 770 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 FAAP100Q0VG06 881 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 GALNT2Q10471 571 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 WASHC5Q12768 1159 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 MPP2Q14168 576 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 C1orf53Q5VUE5 145 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 ZNF534Q76KX8 674 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 SCD5Q86SK9 330 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 MON1AQ86VX9 555 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 CEP57Q86XR8 500 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 AGGF1Q8N302 714 aaeCLIP17.48■□□□□ 0.39
SSR4-201ENST00000320857 SLC44A1Q8WWI5 657 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 SCLYQ96I15 445 aa17.48■□□□□ 0.39
SSR4-201ENST00000320857 EBNA1BP2Q99848 306 aaKnown RBP17.48■□□□□ 0.39
SSR4-201ENST00000320857 SCN5AQ14524 2016 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.47■□□□□ 0.39
SSR4-201ENST00000320857 A0A1W2PQH9 124 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 INHBAP08476 426 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 SLC11A1P49279 550 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 IL9RQ01113 521 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 PPP2R5DQ14738 602 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 QPCTQ16769 361 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 KBTBD12Q3ZCT8 623 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 LRRC34Q8IZ02 419 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 CACNA2D3Q8IZS8 1091 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 ZNF567Q8N184 647 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 NETO2Q8NC67 525 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 HDAC11Q96DB2 347 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 SIGLEC10Q96LC7 697 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 SERPINB11Q96P15 392 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 ATXN2Q99700 1313 aaKnown RBP17.47■□□□□ 0.39
SSR4-201ENST00000320857 KLHL8Q9P2G9 620 aaPredicted RBP17.47■□□□□ 0.39
SSR4-201ENST00000320857 RRP15Q9Y3B9 282 aaKnown RBP17.47■□□□□ 0.39
SSR4-201ENST00000320857 TTLL3Q9Y4R7 772 aa17.47■□□□□ 0.39
SSR4-201ENST00000320857 SNX10Q9Y5X0 201 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms