RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 NR1D1P20393 614 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 EPHB2P29323 1055 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 KPNA1P52294 538 aaPredicted RBP18.38■□□□□ 0.53
RAB39A-201ENST00000320578 LBX1P52954 281 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 MLLT6P55198 1093 aaPredicted RBP18.38■□□□□ 0.53
RAB39A-201ENST00000320578 PPIDQ08752 370 aaKnown RBP18.38■□□□□ 0.53
RAB39A-201ENST00000320578 GALNT2Q10471 571 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 TAF10Q12962 218 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 PDIA2Q13087 525 aaKnown RBP18.38■□□□□ 0.53
RAB39A-201ENST00000320578 SEMA5AQ13591 1074 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 BTG3Q14201 252 aaPredicted RBP18.38■□□□□ 0.53
RAB39A-201ENST00000320578 TRIP4Q15650 581 aaPredicted RBP18.38■□□□□ 0.53
RAB39A-201ENST00000320578 UBAP2Q5T6F2 1119 aaKnown RBP18.38■□□□□ 0.53
RAB39A-201ENST00000320578 SNX30Q5VWJ9 437 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 KCTD16Q68DU8 428 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 RIBC1Q8N443 379 aaPredicted RBP18.38■□□□□ 0.53
RAB39A-201ENST00000320578 COLGALT1Q8NBJ5 622 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 PDZD8Q8NEN9 1154 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 ZNF461Q8TAF7 563 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 CLSTN3Q9BQT9 956 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 CATSPERBQ9H7T0 1116 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 ETNK1Q9HBU6 452 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 DNAJC17Q9NVM6 304 aaKnown RBP18.38■□□□□ 0.53
RAB39A-201ENST00000320578 FETUBQ9UGM5 382 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 NEU3Q9UQ49 428 aa18.38■□□□□ 0.53
RAB39A-201ENST00000320578 TCRBV7S3A2A0A539 114 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 WASH4PA8MWX3 477 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 RGS16O15492 202 aaPredicted RBP18.37■□□□□ 0.53
RAB39A-201ENST00000320578 MAP3K6O95382 1288 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 OR1D2P34982 312 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 PPM1AP35813 382 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 NRLP54845 237 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 RING1Q06587 406 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 RASA2Q15283 850 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 ANKRD20A2Q5SQ80 823 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
RAB39A-201ENST00000320578 ANKRD20A1Q5TYW2 823 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 ANKRD20A3Q5VUR7 823 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 ARHGEF18Q6ZSZ5 1173 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 B4GALNT4Q76KP1 1039 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 CCDC110Q8TBZ0 833 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 LRRC39Q96DD0 335 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 TBC1D31Q96DN5 1066 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 P2RY11Q96G91 374 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 FCRL2Q96LA5 508 aaPredicted RBP18.37■□□□□ 0.53
RAB39A-201ENST00000320578 C9orf72Q96LT7 481 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 VAT1Q99536 393 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 LGMNQ99538 433 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 LRRC4CQ9HCJ2 640 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 PRDM5Q9NQX1 630 aaPredicted RBP18.37■□□□□ 0.53
RAB39A-201ENST00000320578 EIF2B3Q9NR50 452 aaKnown RBP18.37■□□□□ 0.53
RAB39A-201ENST00000320578 ADAM12O43184 909 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 ATP5DP30049 168 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 TBX4P57082 545 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 COG7P83436 770 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 AUHQ13825 339 aaKnown RBP18.37■□□□□ 0.53
RAB39A-201ENST00000320578 FNBP1LQ5T0N5 605 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 ARTNQ5T4W7 220 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 TADA2BQ86TJ2 420 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 TDRPQ86YL5 185 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 ZBED8Q8IZ13 594 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 SH2D3CQ8N5H7 860 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 ATP11CQ8NB49 1132 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 PYROXD1Q8WU10 500 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 CENPHQ9H3R5 247 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 DONSONQ9NYP3 566 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 IGSF9Q9P2J2 1179 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 LGALS13Q9UHV8 139 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 SLC12A6Q9UHW9 1150 aa18.37■□□□□ 0.53
RAB39A-201ENST00000320578 NOVA2Q9UNW9 492 aaKnown RBP18.37■□□□□ 0.53
RAB39A-201ENST00000320578 MRPL42Q9Y6G3 142 aaKnown RBP18.37■□□□□ 0.53
RAB39A-201ENST00000320578 SHOX2O60902 331 aaPredicted RBP18.36■□□□□ 0.53
RAB39A-201ENST00000320578 SPAG6O75602 509 aa18.36■□□□□ 0.53
RAB39A-201ENST00000320578 IGLV3-27P01718 113 aa18.36■□□□□ 0.53
RAB39A-201ENST00000320578 ATF6P18850 670 aa18.36■□□□□ 0.53
RAB39A-201ENST00000320578 PHBP35232 272 aa18.36■□□□□ 0.53
RAB39A-201ENST00000320578 RAB33AQ14088 237 aa18.36■□□□□ 0.53
RAB39A-201ENST00000320578 PARP6Q2NL67 630 aa18.36■□□□□ 0.53
RAB39A-201ENST00000320578 CCDC38Q502W7 563 aa18.36■□□□□ 0.53
RAB39A-201ENST00000320578 RASIP1Q5U651 963 aa18.36■□□□□ 0.53
RAB39A-201ENST00000320578 LRRC49Q8IUZ0 686 aa18.36■□□□□ 0.53
RAB39A-201ENST00000320578 TSGA13Q96PP4 275 aa18.36■□□□□ 0.53
RAB39A-201ENST00000320578 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.36■□□□□ 0.53
RAB39A-201ENST00000320578 MSI1O43347 362 aaKnown RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 SOAT2O75908 522 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 METTL18O95568 372 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 APOEP02649 317 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 MLNP12872 115 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 GARSP41250 739 aaKnown RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 SARNPP82979 210 aaKnown RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 CREMQ03060 361 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 AP1B1Q10567 949 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 WASHC5Q12768 1159 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 KLHDC10Q6PID8 442 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 UBE2Q1Q7Z7E8 422 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 ATP6V0D2Q8N8Y2 350 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 CCNYQ8ND76 341 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 MYRFLQ96LU7 910 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 BCCIPQ9P287 314 aaKnown RBP eCLIP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms