RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SLC35F5Q8WV83 523 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 HTR3CQ8WXA8 447 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 ISL2Q96A47 359 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 CSPG4P5Q96PW8 444 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 NAT9Q9BTE0 207 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 EPB41L1Q9H4G0 881 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 DHX35Q9H5Z1 703 aaKnown RBP19.63■□□□□ 0.73
RTN4-201ENST00000317610 PCDHB12Q9Y5F1 795 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 TNS1Q9HBL0 1735 aaKnown RBP19.62■□□□□ 0.73
RTN4-201ENST00000317610 A6NJR5 290 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 CCDC130P13994 396 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 MAGEA12P43365 314 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 CLCN3P51790 818 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 RBP5P82980 135 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 DLG1Q12959 904 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 LSAMPQ13449 338 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 PDCD2Q16342 344 aaPredicted RBP19.62■□□□□ 0.73
RTN4-201ENST00000317610 ANKRD20A4Q4UJ75 823 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 EFCAB12Q6NXP0 572 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 FRMD7Q6ZUT3 714 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 RIOX2Q8IUF8 465 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 CLMNQ96JQ2 1002 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 KCTD15Q96SI1 283 aaPredicted RBP19.62■□□□□ 0.73
RTN4-201ENST00000317610 PDZD7Q9H5P4 517 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 FZD1Q9UP38 647 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 RAG1P15918 1043 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 HSPA1LP34931 641 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 POU5F1BQ06416 359 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 TBL3Q12788 808 aaKnown RBP19.62■□□□□ 0.73
RTN4-201ENST00000317610 OGFRL1Q5TC84 451 aaPredicted RBP19.62■□□□□ 0.73
RTN4-201ENST00000317610 VWA5B1Q5TIE3 1220 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 CASC4Q6P4E1 433 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 HPS6Q86YV9 775 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 SCUBE3Q8IX30 993 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 PHTF2Q8N3S3 785 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 RTKNQ9BST9 563 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 CYP4F11Q9HBI6 524 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 ARHGAP26Q9UNA1 814 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 AP4E1Q9UPM8 1137 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 USP3Q9Y6I4 520 aa19.62■□□□□ 0.73
RTN4-201ENST00000317610 COX4I1P13073 169 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 MX2P20592 715 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 MGAT1P26572 445 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 NUMBP49757 651 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 SH3BGRP55822 239 aaPredicted RBP19.61■□□□□ 0.73
RTN4-201ENST00000317610 CRADDP78560 199 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 CCDC153Q494R4 210 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 FSCBQ5H9T9 825 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 SH3D19Q5HYK7 790 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 CELF3Q5SZQ8 465 aaKnown RBP19.61■□□□□ 0.73
RTN4-201ENST00000317610 EPGNQ6UW88 154 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 UGT2A3Q6UWM9 527 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 CCDC124Q96CT7 223 aaKnown RBP19.61■□□□□ 0.73
RTN4-201ENST00000317610 DTNBP1Q96EV8 351 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 KCNK16Q96T55 309 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 EVPLQ92817 2033 aa19.61■□□□□ 0.73
RTN4-201ENST00000317610 SMIM31A0A1B0GVY4 71 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 ADCY6O43306 1168 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 OPHN1O60890 802 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 CHN2P52757 468 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 SNX16P57768 344 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 PDK3Q15120 406 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 TRIP10Q15642 601 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 KYAT1Q16773 422 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 MMEL1Q495T6 779 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 PPM1JQ5JR12 505 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 MICALL2Q8IY33 904 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 NAT14Q8WUY8 206 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 JDP2Q8WYK2 163 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 DPP3Q9NY33 737 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 CDY2AQ9Y6F7 541 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 CDY1Q9Y6F8 540 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 CPA3P15088 417 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 NCF2P19878 526 aaPredicted RBP19.6■□□□□ 0.73
RTN4-201ENST00000317610 GP5P40197 560 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 SLC26A2P50443 739 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 KLF10Q13118 480 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 ITGA9Q13797 1035 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 METTL21CQ5VZV1 264 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 POTEAQ6S8J7 498 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 EEPD1Q7L9B9 569 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 IFNLR1Q8IU57 520 aaPredicted RBP19.6■□□□□ 0.73
RTN4-201ENST00000317610 COLGALT1Q8NBJ5 622 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 MAGEB5Q9BZ81 275 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 SHCBP1LQ9BZQ2 653 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 CDH19Q9H159 772 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 NDUFA13Q9P0J0 144 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 ADAM28Q9UKQ2 775 aa19.6■□□□□ 0.73
RTN4-201ENST00000317610 NOP56O00567 594 aaKnown RBP19.59■□□□□ 0.73
RTN4-201ENST00000317610 ZBTB14O43829 449 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 HBP1O60381 514 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 PEX10O60683 326 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 TYK2P29597 1187 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 SERPINB6P35237 376 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 GARSP41250 739 aaKnown RBP19.59■□□□□ 0.73
RTN4-201ENST00000317610 PHKA2P46019 1235 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 ATXN1P54253 815 aaKnown RBP19.59■□□□□ 0.73
RTN4-201ENST00000317610 TCHHL1Q5QJ38 904 aaPredicted RBP19.59■□□□□ 0.73
RTN4-201ENST00000317610 GRTP1Q5TC63 336 aa19.59■□□□□ 0.73
RTN4-201ENST00000317610 KLRG1Q96E93 195 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms