RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 PCDHB7Q9Y5E2 793 aa7.4□□□□□ -1.22
NPHP1-201ENST00000316534 MUC22E2RYF6 1773 aaPredicted RBP7.4□□□□□ -1.23
NPHP1-201ENST00000316534 ERI2A8K979 691 aaKnown RBP7.4□□□□□ -1.23
NPHP1-201ENST00000316534 I3L4J1 428 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 RTN3O95197 1032 aaPredicted RBP7.4□□□□□ -1.23
NPHP1-201ENST00000316534 IVLP07476 585 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 DHRS4L1P0CG22 281 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 CCNCP24863 283 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 GJC1P36383 396 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 KRT71Q3SY84 523 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 DARS2Q6PI48 645 aaKnown RBP7.4□□□□□ -1.23
NPHP1-201ENST00000316534 CMTR2Q8IYT2 770 aaKnown RBP7.4□□□□□ -1.23
NPHP1-201ENST00000316534 UMODL1-AS1Q8N2C9 162 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 ATP11CQ8NB49 1132 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 CRISPLD1Q9H336 500 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 ETNK1Q9HBU6 452 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 TMPRSS4Q9NRS4 437 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.4□□□□□ -1.23
NPHP1-201ENST00000316534 PCDHB5Q9Y5E4 795 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 KIAA1549LQ6ZVL6 1849 aa7.4□□□□□ -1.23
NPHP1-201ENST00000316534 SHROOM3Q8TF72 1996 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 CXorf51AA0A1B0GTR3 108 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 GOLGA6L10A6NI86 522 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 SIN3BO75182 1162 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 FAM107AO95990 144 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 DNAJB2P25686 324 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 CD68P34810 354 aaPredicted RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 GARSP41250 739 aaKnown RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 SSR1P43307 286 aaKnown RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 GJA8P48165 433 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 MSLNQ13421 630 aaPredicted RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 STXBP5Q5T5C0 1151 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 FUT10Q6P4F1 479 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 GSTA5Q7RTV2 222 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 FAM131BQ86XD5 332 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 SPATA2LQ8IUW3 424 aaPredicted RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 CCNJLQ8IV13 435 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 FAM217AQ8IXS0 508 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 SH3TC2Q8TF17 1288 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 CASP10Q92851 521 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 TOP1MTQ969P6 601 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 P2RY11Q96G91 374 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 NOL6Q9H6R4 1146 aaKnown RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 MRM3Q9HC36 420 aaKnown RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 XAB2Q9HCS7 855 aaKnown RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 OLA1Q9NTK5 396 aaKnown RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 TMEM248Q9NWD8 314 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 NOD1Q9Y239 953 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 PCDHA11Q9Y5I1 949 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 EEF2KO00418 725 aaKnown RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 KCNN4O15554 427 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 DRD4P21917 467 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 PTPN3P26045 913 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 ADRA1AP35348 466 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 ARL4AP40617 200 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 GEMIN4P57678 1058 aaKnown RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 DSG1Q02413 1049 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 MPP2Q14168 576 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 MTFR1Q15390 333 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 KLHL38Q2WGJ6 581 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 ARL13BQ3SXY8 428 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 ZNF280DQ6N043 979 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 C1orf228Q6PIY5 440 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 ANKS3Q6ZW76 656 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 SUGP1Q8IWZ8 645 aaKnown RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 GBA3Q9H227 469 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 C10orf88Q9H8K7 445 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 SAYSD1Q9NPB0 183 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 COL4A3Q01955 1670 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 PCNTO95613 3336 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 ABHD14A-ACY1A0A1B0GW23 586 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 BAIAP3O94812 1187 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 ASMTLO95671 621 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 ERCC2P18074 760 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 NEK3P51956 506 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 MLLT6P55198 1093 aaPredicted RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 USP46P62068 366 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 DYNLT1P63172 113 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 HTRA4P83105 476 aaPredicted RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 BTG3Q14201 252 aaPredicted RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 TRIP4Q15650 581 aaPredicted RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 MARK2Q7KZI7 788 aaKnown RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 TAOK1Q7L7X3 1001 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 SPATS2Q86XZ4 545 aaKnown RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 ZNF567Q8N184 647 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 SCAMP5Q8TAC9 235 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 SLC7A14Q8TBB6 771 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 SP7Q8TDD2 431 aaPredicted RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 SERPINB11Q96P15 392 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 XPO6Q96QU8 1125 aaKnown RBP7.39□□□□□ -1.23
NPHP1-201ENST00000316534 RXFP1Q9HBX9 757 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 TRIM17Q9Y577 477 aa7.39□□□□□ -1.23
NPHP1-201ENST00000316534 RGS16O15492 202 aaPredicted RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 MAFKO60675 156 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 EFCAB14O75071 495 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 LRIG2O94898 1065 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 OLFM2O95897 454 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 NCAM1P13591 858 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 ATF6P18850 670 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 NDST2P52849 883 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms