RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 GARTP22102 1010 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 SKIV2L2P42285 1042 aaKnown RBP8.92□□□□□ -0.98
USF3-201ENST00000316407 PRMT9Q6P2P2 845 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 DCAF4Q8WV16 495 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 ACAD9Q9H845 621 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 SP140LQ9H930 580 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 MID1IP1Q9NPA3 183 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 RGS17Q9UGC6 210 aaPredicted RBP8.92□□□□□ -0.98
USF3-201ENST00000316407 SYNPO2Q9UMS6 1093 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 PRDX5P30044 214 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 GSTM5P46439 218 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 IL18Q14116 193 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 MYO1HQ8N1T3 1032 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 NAT14Q8WUY8 206 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 MAN1C1Q9NR34 630 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 SH3D21A4FU49 640 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 AZGP1P25311 298 aaKnown RBP8.92□□□□□ -0.98
USF3-201ENST00000316407 SMU1Q2TAY7 513 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 EHD1Q9H4M9 534 aa8.92□□□□□ -0.98
USF3-201ENST00000316407 VPS26AO75436 327 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 PHC1P78364 1004 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 CRADDP78560 199 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 SAMD4BQ5PRF9 694 aaKnown RBP8.91□□□□□ -0.98
USF3-201ENST00000316407 PPP1R18Q6NYC8 613 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 ZNF540Q8NDQ6 660 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 CLK4Q9HAZ1 481 aaKnown RBP8.91□□□□□ -0.98
USF3-201ENST00000316407 BSDC1Q9NW68 430 aaPredicted RBP8.91□□□□□ -0.98
USF3-201ENST00000316407 PFDN2Q9UHV9 154 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 UGGT1Q9NYU2 1555 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 ELK3P41970 407 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 CRKP46108 304 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 PTENP60484 403 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 FAM131AQ6UXB0 335 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 SLC26A11Q86WA9 606 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 MOSPD2Q8NHP6 518 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 WDR12Q9GZL7 423 aaKnown RBP8.91□□□□□ -0.98
USF3-201ENST00000316407 DCP1AQ9NPI6 582 aaPredicted RBP8.91□□□□□ -0.98
USF3-201ENST00000316407 UNC5CO95185 931 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 SLC15A2Q16348 729 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 DAW1Q8N136 415 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 NOL11Q9H8H0 719 aaKnown RBP8.91□□□□□ -0.98
USF3-201ENST00000316407 ABCB9Q9NP78 766 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 HLA-DRAP01903 254 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 FSTL1Q12841 308 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 TYSND1Q2T9J0 566 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 FAM20AQ96MK3 541 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 FBXO6Q9NRD1 293 aaPredicted RBP8.91□□□□□ -0.98
USF3-201ENST00000316407 SHANK2Q9UPX8 1470 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 PRDM15P57071 1507 aaPredicted RBP8.91□□□□□ -0.98
USF3-201ENST00000316407 UBE2QL1A1L167 161 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 SFNP31947 248 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 GRIK3Q13003 919 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 OGFOD2Q6N063 350 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 SH3BP4Q9P0V3 963 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 USP18Q9UMW8 372 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 ZNF879B4DU55 563 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 HAT1O14929 419 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 ALDH4A1P30038 563 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 QRICH1Q2TAL8 776 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 PAGE2Q7Z2X7 111 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 TNIP3Q96KP6 325 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 PNPLA3Q9NST1 481 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 CROTQ9UKG9 612 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 BANF1O75531 89 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 RPN2P04844 631 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 YWHAQP27348 245 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 PHKG1Q16816 387 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 TBC1D22BQ9NU19 505 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 PCDHB2Q9Y5E7 798 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 SERPINE1P05121 402 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 ETS1P14921 441 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 SSTR1P30872 391 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 FDFT1P37268 417 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 CCDC185Q8N715 623 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 BHLHE41Q9C0J9 482 aaPredicted RBP8.91□□□□□ -0.98
USF3-201ENST00000316407 SENP6Q9GZR1 1112 aaPredicted RBP8.91□□□□□ -0.98
USF3-201ENST00000316407 RPS6KB2Q9UBS0 482 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 AP4E1Q9UPM8 1137 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 CES2O00748 559 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 CCDC166P0CW27 439 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 STAT5AP42229 794 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 STAT5BP51692 787 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 PJA1Q8NG27 643 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 CCDC126Q96EE4 140 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 RUSC1Q9BVN2 902 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 SENP2Q9HC62 589 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 STK25O00506 426 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 MRASO14807 208 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 EXTL3O43909 919 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 ARHGEF7Q14155 803 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 LIN54Q6MZP7 749 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 L3MBTL3Q96JM7 780 aaPredicted RBP8.91□□□□□ -0.98
USF3-201ENST00000316407 SERAC1Q96JX3 654 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 PHF20Q9BVI0 1012 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 GPR108Q9NPR9 543 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 COQ6Q9Y2Z9 468 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 BCLAF3A2AJT9 711 aaKnown RBP8.91□□□□□ -0.98
USF3-201ENST00000316407 SPIRE1Q08AE8 756 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 AMER2Q8N7J2 671 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 MINDY2Q8NBR6 621 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms