RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CTDP1Q9Y5B0 961 aaPredicted RBP8.08□□□□□ -1.12
CNOT4-201ENST00000315544 GOLGA6L10A0A0M3HER8 536 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 MYADML2A6NDP7 307 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 GOLGA6L10A6NI86 522 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 PLIN3O60664 434 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 KPNA6O60684 536 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 HNRNPCL1O60812 293 aaKnown RBP8.08□□□□□ -1.12
CNOT4-201ENST00000315544 ECM2O94769 699 aaPredicted RBP8.08□□□□□ -1.12
CNOT4-201ENST00000315544 TJP3O95049 919 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 C8BP07358 591 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 ITGAXP20702 1163 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 ALDH3A1P30838 453 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 IDH3AP50213 366 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 GTF2A1P52655 376 aaPredicted RBP8.08□□□□□ -1.12
CNOT4-201ENST00000315544 CDH8P55286 799 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 STRN3Q13033 797 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 PDIA2Q13087 525 aaKnown RBP8.08□□□□□ -1.12
CNOT4-201ENST00000315544 ACAP2Q15057 778 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 TCTN1Q2MV58 587 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 TMEM207Q6UWW9 146 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 GADL1Q6ZQY3 521 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 ARMCX2Q7L311 632 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 ALKBH8Q96BT7 664 aaKnown RBP8.08□□□□□ -1.12
CNOT4-201ENST00000315544 ERP27Q96DN0 273 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 CEP170P1Q96L14 293 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 SLX1AQ9BQ83 275 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 CCDC28BQ9BUN5 200 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 DPEP3Q9H4B8 488 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 ABCD2Q9UBJ2 740 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 RASAL2Q9UJF2 1139 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 FAM237BA0A1B0GVD1 139 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 RAD21O60216 631 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 SLC26A2P50443 739 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 RAB27AP51159 221 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 PTK7Q13308 1070 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 XKR9Q5GH70 373 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 NUGGCQ68CJ6 796 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 TAOK1Q7L7X3 1001 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 SRRM1Q8IYB3 904 aaKnown RBP8.08□□□□□ -1.12
CNOT4-201ENST00000315544 TNS4Q8IZW8 715 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 GALNT15Q8N3T1 639 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 ATP6V0A1Q93050 837 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 CSPG4P5Q96PW8 444 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 NRDE2Q9H7Z3 1164 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 EHMT1Q9H9B1 1298 aa8.08□□□□□ -1.12
CNOT4-201ENST00000315544 TCAF2A6NFQ2 919 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 DDX39AO00148 427 aaKnown RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 FBP2O00757 339 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 PSMG1O95456 288 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 CYP2B6P20813 491 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 ITGB8P26012 769 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 SSTR3P32745 418 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 ALDH3B2P48448 385 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 EFNA5P52803 228 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 GBE1Q04446 702 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 TRIP13Q15645 432 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 C15orf59Q2T9L4 293 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 FAM133BQ5BKY9 247 aaKnown RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 SNRNP48Q6IEG0 339 aaKnown RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 FAM171BQ6P995 826 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 ELMSAN1Q6PJG2 1045 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 XKR5Q6UX68 686 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 RAPH1Q70E73 1250 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 CCDC91Q7Z6B0 441 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 PCGF5Q86SE9 256 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 OSTM1Q86WC4 334 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 ACMSDQ8TDX5 336 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 PCMTD1Q96MG8 357 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 MMP19Q99542 508 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 PLCD4Q9BRC7 762 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 SIKE1Q9BRV8 207 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 SNRNP25Q9BV90 132 aaKnown RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 DNMT3BQ9UBC3 853 aaKnown RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 RNF11Q9Y3C5 154 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 A0A1W2PQ45 241 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 A0A1W2PQY0 241 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 KLHL33A6NCF5 533 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 ASB14A6NK59 587 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 A8MXQ7 604 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 RASA4BC9J798 803 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 H0YCG3 227 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 PITPNM1O00562 1244 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 RASA4O43374 803 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 CABYRO75952 493 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 ATF2P15336 505 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 SERPINB3P29508 390 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 SERPINB4P48594 390 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 BST1Q10588 318 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 SFT2D3Q587I9 215 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 SAMD1Q6SPF0 538 aaPredicted RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 USP51Q70EK9 711 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 CHERPQ8IWX8 916 aaKnown RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 CCDC105Q8IYK2 499 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 TEX9Q8N6V9 391 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 CNTD1Q8N815 330 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 DACH2Q96NX9 599 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 SIGLEC11Q96RL6 698 aa8.07□□□□□ -1.12
CNOT4-201ENST00000315544 SRPK1Q96SB4 655 aaKnown RBP8.07□□□□□ -1.12
CNOT4-201ENST00000315544 ETNK1Q9HBU6 452 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms