RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 PPP1R15BQ5SWA1 713 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 NUGGCQ68CJ6 796 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 SPECC1LQ69YQ0 1117 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 BEND5Q7L4P6 421 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 ASCL5Q7RTU5 278 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 TMC6Q7Z403 805 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 ADIPOR2Q86V24 386 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 ZNF513Q8N8E2 541 aaPredicted RBP12.47□□□□□ -0.41
SCFD1-201ENST00000311943 RLN3Q8WXF3 142 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 ARHGEF26Q96DR7 871 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 TRIM5Q9C035 493 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 CIPCQ9C0C6 399 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 LUC7L2Q9Y383 392 aaKnown RBP12.47□□□□□ -0.41
SCFD1-201ENST00000311943 EML5Q05BV3 1969 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 DMXL1Q9Y485 3027 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 A0A0A0MRY4 1105 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 A0A1W2PQJ5 194 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 HRO43593 1189 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 MZF1P28698 734 aaPredicted RBP12.47□□□□□ -0.41
SCFD1-201ENST00000311943 SLC11A2P49281 568 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 CXCR3P49682 368 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 LMAN2Q12907 356 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 MAMLD1Q13495 774 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 FUT11Q495W5 492 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 ANO7Q6IWH7 933 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 UNC45BQ8IWX7 931 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 FAM160A2Q8N612 972 aaPredicted RBP12.47□□□□□ -0.41
SCFD1-201ENST00000311943 NETO2Q8NC67 525 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 MSANTD3Q96H12 275 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 LMLNQ96KR4 655 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 SELENOOQ9BVL4 669 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 THAP2Q9H0W7 228 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 WDCPQ9H6R7 721 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 NDFIP2Q9NV92 336 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCFD1-201ENST00000311943 GPATCH2LQ9NWQ4 482 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 WDR35Q9P2L0 1181 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 ACTL7AQ9Y615 435 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 SRGAP2O75044 1071 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 APOEP02649 317 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 CCR1P32246 355 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 EIF4A3P38919 411 aaKnown RBP12.46□□□□□ -0.41
SCFD1-201ENST00000311943 IL12RB1P42701 662 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 AMPD2Q01433 879 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 MPPE1Q53F39 396 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 TRIM72Q6ZMU5 477 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 ZDHHC17Q8IUH5 632 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 ZNF683Q8IZ20 524 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 CHPFQ8IZ52 775 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 DCLK2Q8N568 766 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 MDGA1Q8NFP4 955 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 FAM172AQ8WUF8 416 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 XPO6Q96QU8 1125 aaKnown RBP12.46□□□□□ -0.41
SCFD1-201ENST00000311943 SPTLC3Q9NUV7 552 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 MYO6Q9UM54 1294 aa12.46□□□□□ -0.41
SCFD1-201ENST00000311943 DCHS1Q96JQ0 3298 aa12.46□□□□□ -0.42
SCFD1-201ENST00000311943 ITIH6Q6UXX5 1313 aa12.46□□□□□ -0.42
SCFD1-201ENST00000311943 A0A1W2PQF6 199 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 PRKCHP24723 683 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 EIF2DP41214 584 aaKnown RBP12.45□□□□□ -0.42
SCFD1-201ENST00000311943 PTPN5P54829 565 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 CRY1Q16526 586 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 DNAJC24Q6P3W2 148 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 CHST9Q7L1S5 443 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 TFAP2DQ7Z6R9 452 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 ALYREFQ86V81 257 aaKnown RBP12.45□□□□□ -0.42
SCFD1-201ENST00000311943 MFN1Q8IWA4 741 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 KIAA1958Q8N8K9 716 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 C3orf20Q8ND61 904 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 BTN2A3PQ96KV6 586 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 RPL10LQ96L21 214 aaKnown RBP12.45□□□□□ -0.42
SCFD1-201ENST00000311943 NUP58Q9BVL2 599 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 CD248Q9HCU0 757 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 ARHGEF38Q9NXL2 777 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 CNOT8Q9UFF9 292 aaKnown RBP12.45□□□□□ -0.42
SCFD1-201ENST00000311943 ZNF510Q9Y2H8 683 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 SPEGQ15772 3267 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 SIGLEC16A6NMB1 481 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 CYBBP04839 570 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 VAV1P15498 845 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 STK19P49842 368 aaPredicted RBP12.45□□□□□ -0.42
SCFD1-201ENST00000311943 CCR3P51677 355 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 TBX2Q13207 712 aaPredicted RBP12.45□□□□□ -0.42
SCFD1-201ENST00000311943 CA9Q16790 459 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 PTPRNQ16849 979 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 TXNRD3NBQ6F5E7 133 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 SCYL2Q6P3W7 929 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 CCAR2Q8N163 923 aaKnown RBP12.45□□□□□ -0.42
SCFD1-201ENST00000311943 ZNF653Q96CK0 615 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 RPRD1AQ96P16 312 aaPredicted RBP12.45□□□□□ -0.42
SCFD1-201ENST00000311943 PEBP4Q96S96 227 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 ABHD10Q9NUJ1 306 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 GGA2Q9UJY4 613 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 DAAM1Q9Y4D1 1078 aa12.45□□□□□ -0.42
SCFD1-201ENST00000311943 SERPING1P05155 500 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 GPD1P21695 349 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 GLDCP23378 1020 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 RDXP35241 583 aaKnown RBP12.44□□□□□ -0.42
SCFD1-201ENST00000311943 CSKP41240 450 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 ZNF75DP51815 510 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms