RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 FASP25445 335 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 CYP51A1Q16850 503 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 FAM83EQ2M2I3 478 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 TDRD5Q8NAT2 981 aaKnown RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 AGAP11Q8TF27 550 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 FAR2Q96K12 515 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 QKIQ96PU8 341 aaKnown RBP eCLIP8.38□□□□□ -1.074e-14■■■■■ 30.6
VPS41-202ENST00000310301 PAFAH2Q99487 392 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 DNAJC7Q99615 494 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 KCTD14Q9BQ13 255 aaPredicted RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 TLE6Q9H808 572 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 AGAP1Q9UPQ3 857 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 ABHD14A-ACY1A0A1B0GW23 586 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 SNTNA6NMZ2 147 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 TK2O00142 265 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 TM9SF1O15321 606 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 MLNP12872 115 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 PIK3R1P27986 724 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 RRM2P31350 389 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 ATP12AP54707 1039 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 GALNTL6Q49A17 601 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 SYTL3Q4VX76 610 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 TDRD10Q5VZ19 366 aaKnown RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 IL31Q6EBC2 164 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 VPS37AQ8NEZ2 397 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 REEP2Q9BRK0 252 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 PIF1Q9H611 641 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 EIF3LQ9Y262 564 aaKnown RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 HEATR9A2RTY3 570 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 LGR5O75473 907 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 GRAP2O75791 330 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 SUPT7LO94864 414 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 KRT6AP02538 564 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 CACNB2Q08289 660 aaPredicted RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 NR1D2Q14995 579 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 ZSWIM7Q19AV6 140 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 FAXCQ5TGI0 409 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 DENND1BQ6P3S1 775 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 SVOPQ8N4V2 548 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 KYQ8NBH2 561 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 C1orf131Q8NDD1 294 aaKnown RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 ATXN2LQ8WWM7 1075 aaKnown RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 RNFT2Q96EX2 444 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 F8W810 466 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 RAD51BO15315 384 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 IDH3BO43837 385 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 PSMG1O95456 288 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 FLT3P36888 993 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 PRIM2P49643 509 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 CRYBB1P53674 252 aaPredicted RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 AKIRIN2Q53H80 203 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 SPANXN2Q5MJ10 180 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 SLC27A1Q6PCB7 646 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 C4orf22Q6V702 233 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 USP49Q70CQ1 688 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 IPMKQ8NFU5 416 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 RORBQ92753 470 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 SKA1Q96BD8 255 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 ERGIC2Q96RQ1 377 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 CHID1Q9BWS9 393 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 APOL5Q9BWW9 433 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 DMAP1Q9NPF5 467 aaPredicted RBP8.38□□□□□ -1.07
VPS41-202ENST00000310301 NHSQ6T4R5 1651 aa8.38□□□□□ -1.07
VPS41-202ENST00000310301 STRCP1A6NGW2 1772 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 PNMA8CA0A1B0GUJ8 204 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 CBX6O95503 412 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 ZNF682O95780 498 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 PTK6Q13882 451 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 ACAP1Q15027 740 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 ATAT1Q5SQI0 421 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 PLA2G4FQ68DD2 849 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 CHSY1Q86X52 802 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 EFHBQ8N7U6 833 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 ATG16L2Q8NAA4 619 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 FEZF2Q8TBJ5 459 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 ACTRT1Q8TDG2 376 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 PPP1R14BQ96C90 147 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 RRN3Q9NYV6 651 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 UXTQ9UBK9 157 aaPredicted RBP8.37□□□□□ -1.07
VPS41-202ENST00000310301 TUBGCP4Q9UGJ1 667 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 FCHO1O14526 889 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 VTNP04004 478 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 CHN2P52757 468 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 RAD23AP54725 363 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 XRCC4Q13426 336 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 POLD3Q15054 466 aaPredicted RBP8.37□□□□□ -1.07
VPS41-202ENST00000310301 SEC23AQ15436 765 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 DDR2Q16832 855 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 WDR72Q3MJ13 1102 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 OTUD3Q5T2D3 398 aaPredicted RBP8.37□□□□□ -1.07
VPS41-202ENST00000310301 TYW3Q6IPR3 259 aaKnown RBP8.37□□□□□ -1.07
VPS41-202ENST00000310301 OTOP2Q7RTS6 562 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 KBTBD2Q8IY47 623 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 FAM45AQ8TCE6 357 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 FBXO25Q8TCJ0 367 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 CENPTQ96BT3 561 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 OXNAD1Q96HP4 312 aaPredicted RBP8.37□□□□□ -1.07
VPS41-202ENST00000310301 SEPHS2Q99611 448 aa8.37□□□□□ -1.07
VPS41-202ENST00000310301 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.37□□□□□ -1.07
VPS41-202ENST00000310301 SPG21Q9NZD8 308 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms