RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 FAM171A1Q5VUB5 890 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 SCARA3Q6AZY7 606 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ADAT2Q7Z6V5 191 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PIGZQ86VD9 579 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 CMTR2Q8IYT2 770 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 DNAAF3Q8N9W5 541 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PPHLN1Q8NEY8 458 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 GSDMBQ8TAX9 411 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PLEKHO2Q8TD55 490 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 AENQ8WTP8 325 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 DEFB118Q96PH6 123 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PRKD2Q9BZL6 878 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PRDM5Q9NQX1 630 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 TUBGCP4Q9UGJ1 667 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 NENFQ9UMX5 172 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 NEU2Q9Y3R4 380 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 FARP1Q9Y4F1 1045 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 KCNN4O15554 427 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 STAMBPO95630 424 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ABL1P00519 1130 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 POMCP01189 267 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ADH1AP07327 375 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 NR1D1P20393 614 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 CCND3P30281 292 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 GPD2P43304 727 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 GLUD2P49448 558 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 RASSF2P50749 326 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MTTPP55157 894 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 LPIN1Q14693 890 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MARCH8Q5T0T0 291 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 C6orf163Q5TEZ5 329 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ATG16L1Q676U5 607 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 DLK2Q6UY11 383 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 KIAA2013Q8IYS2 634 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 FIBCD1Q8N539 461 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 C1orf54Q8WWF1 131 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MYLPFQ96A32 169 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 TSPAN17Q96FV3 270 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 RNF157Q96PX1 679 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MRPL45Q9BRJ2 306 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 SYT11Q9BT88 431 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MINDY3Q9H8M7 445 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 LRRC40Q9H9A6 602 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MRPL40Q9NQ50 206 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MKS1Q9NXB0 559 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ABI2Q9NYB9 513 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 GABRQQ9UN88 632 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PCDHGA3Q9Y5H0 932 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 HEY1Q9Y5J3 304 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ACTL7BQ9Y614 415 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MEFVO15553 781 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ATMINO43313 823 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 AOC2O75106 756 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PDE5AO76074 875 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 APOA4P06727 396 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 MLNP12872 115 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 CYP2F1P24903 491 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 CDC25CP30307 473 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 CDH8P55286 799 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 TBX4P57082 545 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 NAA20P61599 178 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PPP2R5DQ14738 602 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ZBTB6Q15916 424 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 SLC45A4Q5BKX6 768 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 TJAP1Q5JTD0 557 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 SHQ1Q6PI26 577 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 DEFB106AQ8N104 65 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ZCCHC9Q8N567 271 aaKnown RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PPP4R1Q8TF05 950 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ZNF512Q96ME7 567 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 CENPKQ9BS16 269 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 FSD1LQ9BXM9 530 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 ANKZF1Q9H8Y5 726 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 TRPC7Q9HCX4 862 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 EURLQ9NYK6 297 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 CLIC5Q9NZA1 410 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PSMC3IPQ9P2W1 217 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 FETUBQ9UGM5 382 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 CROTQ9UKG9 612 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 LZTS1Q9Y250 596 aa6.17□□□□□ -1.42
SEC22A-201ENST00000309934 PRG3Q9Y2Y8 225 aaPredicted RBP6.17□□□□□ -1.42
SEC22A-201ENST00000309934 A0A1W2PQ67 120 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 BCLAF3A2AJT9 711 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 RCCD1A6NED2 376 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 C2CD4BA6NLJ0 364 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 INPPL1O15357 1258 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 MTRF1O75570 445 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 GJB1P08034 283 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 PYGMP11217 842 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ZNF235Q14590 738 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 PTPN20Q4JDL3 420 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 TAF1BQ53T94 588 aaPredicted RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ZBTB41Q5SVQ8 909 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 PPP1R26Q5T8A7 1209 aaPredicted RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 DENND5BQ6ZUT9 1274 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 C11orf74Q86VG3 221 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ALLCQ8N6M5 410 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 NOA1Q8NC60 698 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms