RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 LGI2Q8N0V4 545 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 SIX5Q8N196 739 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 RNF10Q8N5U6 811 aaKnown RBP18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 FAM3CQ92520 227 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 CD101Q93033 1021 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 RPRD1AQ96P16 312 aaPredicted RBP18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 P2RY13Q9BPV8 354 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 DEC1Q9P2X7 70 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 OR12D3Q9UGF7 316 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 FZD10Q9ULW2 581 aa18.5■□□□□ 0.55
SSSCA1-201ENST00000309328 IGLV3-10A0A075B6K4 115 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 A0A1B0GVM2 712 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 KANSL1LA0AUZ9 987 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 TCAF2A6NFQ2 919 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 OTOL1A6NHN0 477 aaPredicted RBP18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 CLDN11O75508 207 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 SLC6A4P31645 630 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 FBXO43Q4G163 708 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 LRRC38Q5VT99 294 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 C11orf63Q6NUN7 778 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 FBXL22Q6P050 247 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 SYCE1Q8N0S2 351 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 PNKPQ96T60 521 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 DESI2Q9BSY9 194 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 SIK2Q9H0K1 926 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 MFSD1Q9H3U5 465 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 XPO7Q9UIA9 1087 aaKnown RBP18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 CA14Q9ULX7 337 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 AP4E1Q9UPM8 1137 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 SLC27A6Q9Y2P4 619 aa18.49■□□□□ 0.55
SSSCA1-201ENST00000309328 E9PAM4 449 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 HOXD9P28356 352 aaPredicted RBP18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 GRIA2P42262 883 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 MAGEA9P43362 315 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 NAP1L1P55209 391 aaKnown RBP18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 CDH4P55283 916 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 CDH18Q13634 790 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 LRRC32Q14392 662 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 MESDQ14696 234 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 DGKKQ5KSL6 1271 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 GRAMD4Q6IC98 578 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 RFWD3Q6PCD5 774 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 SYNPOQ8N3V7 929 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 CCDC185Q8N715 623 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 FBXO10Q9UK96 956 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 VANGL2Q9ULK5 521 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 MYO10Q9HD67 2058 aa18.48■□□□□ 0.55
SSSCA1-201ENST00000309328 GOLGA6L7A0A1B0GV03 622 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 KRBA1A5PL33 1030 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 TMEM221A6NGB7 291 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 DRGXA6NNA5 263 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 M0R296 226 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 DLL1O00548 723 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 FGF10O15520 208 aaPredicted RBP18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 TBL1XO60907 577 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 TULP3O75386 442 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 LUC7L3O95232 432 aaKnown RBP18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 APODP05090 189 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 DGKGP49619 791 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 VCPP55072 806 aaKnown RBP18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 SLC12A1Q13621 1099 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 TMEM196Q5HYL7 178 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 BMP8AQ7Z5Y6 402 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 MFN1Q8IWA4 741 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 MAP7D3Q8IWC1 876 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 ARFGAP1Q8N6T3 406 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 KCNV2Q8TDN2 545 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 WFIKKN2Q8TEU8 576 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 TBC1D31Q96DN5 1066 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 BTBD6Q96KE9 485 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 PRICKLE1Q96MT3 831 aaPredicted RBP18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 IER2Q9BTL4 223 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 ZYG11BQ9C0D3 744 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 CATSPERBQ9H7T0 1116 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 ZWILCHQ9H900 591 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 DNAJC17Q9NVM6 304 aaKnown RBP18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 STIM2Q9P246 746 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 RCOR3Q9P2K3 495 aaPredicted RBP18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 PCSK1NQ9UHG2 260 aa18.47■□□□□ 0.55
SSSCA1-201ENST00000309328 A0A0A0MRY4 1105 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 RCCD1A6NED2 376 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 ZSCAN12O43309 604 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 TIMM44O43615 452 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 SPOPO43791 374 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 TSPAN3O60637 253 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 OPRD1P41143 372 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 SSR1P43307 286 aaKnown RBP18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 HCAR3P49019 387 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 SLC25A11Q02978 314 aaKnown RBP18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 ZNF177Q13360 481 aaPredicted RBP18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 DMC1Q14565 340 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 EIF4HQ15056 248 aaKnown RBP18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 DPYSL2Q16555 572 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 GAB4Q2WGN9 574 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 MANEALQ5VSG8 457 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 ZNF783Q6ZMS7 281 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 ANKS1BQ7Z6G8 1248 aa18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 SETD3Q86TU7 594 aaPredicted RBP18.46■□□□□ 0.55
SSSCA1-201ENST00000309328 VSIG1Q86XK7 387 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms