RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 CNDP1Q96KN2 507 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 WRAP53Q9BUR4 548 aaKnown RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 WWP1Q9H0M0 922 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 NXF3Q9H4D5 531 aaKnown RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 ELOVL6Q9H5J4 265 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 MAT2BQ9NZL9 334 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 TMEM120BA0PK00 339 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 KIF1CO43896 1103 aaKnown RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 POLD2P49005 469 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 NCKAP1LP55160 1127 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 PKN1Q16512 942 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 OR14C36Q8NHC7 312 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 VTA1Q9NP79 307 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 FBXO6Q9NRD1 293 aaPredicted RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 VPS45Q9NRW7 570 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 MARCH2Q9P0N8 246 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 BARX2Q9UMQ3 279 aaPredicted RBP7.98□□□□□ -1.13
SCN9A-201ENST00000303354 PSMD13Q9UNM6 376 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 RFX7Q2KHR2 1363 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 DNTTP04053 509 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 GSNP06396 782 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 CYP2A7P20853 494 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 LPIN3Q9BQK8 851 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 RIPK3Q9Y572 518 aa7.98□□□□□ -1.13
SCN9A-201ENST00000303354 FSBPO95073 299 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 CXCR3P49682 368 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 C4orf19Q8IY42 314 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 IL31RAQ8NI17 732 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 KAT5Q92993 513 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 GMCL1Q96IK5 515 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 KLHL5Q96PQ7 755 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 MKNK1Q9BUB5 465 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 FBXO44Q9H4M3 255 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 SEMA4BQ9NPR2 832 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 ITGA11Q9UKX5 1188 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 MRFAP1Q9Y605 127 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 TARBP1Q13395 1621 aaKnown RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 NFASCO94856 1347 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 LUC7L3O95232 432 aaKnown RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 EPORP19235 508 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 BGNP21810 368 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 UGP2Q16851 508 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 ARMC12Q5T9G4 340 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 LINC00523Q86TU6 105 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 C12orf50Q8NA57 414 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 VPS37AQ8NEZ2 397 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 KAZALD1Q96I82 304 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 MRPL45Q9BRJ2 306 aaKnown RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 UBA2Q9UBT2 640 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 FFAR3O14843 346 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 GPR42O15529 346 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 HMGCRP04035 888 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 NTRK1P04629 796 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 CFIP05156 583 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 OR56A5P0C7T3 313 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 SEC24CP53992 1094 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 TRIP4Q15650 581 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 FGD3Q5JSP0 725 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 LEMD2Q8NC56 503 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 CASP10Q92851 521 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 CCT7Q99832 543 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 PORCNQ9H237 461 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 KCNF1Q9H3M0 494 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 ASB8Q9H765 288 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 IMP3Q9NV31 184 aaKnown RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 CFAP97Q9P2B7 532 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 CEP170BQ9Y4F5 1589 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 MSI1O43347 362 aaKnown RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 CNGA3Q16281 694 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 ZIM3Q96PE6 472 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 PAIP2BQ9ULR5 123 aaKnown RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 A0A1W2PQC6 194 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 TMEM253P0C7T8 217 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 SERPINB3P29508 390 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 PRSS55Q6UWB4 352 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 SAPCD2Q86UD0 394 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 PPP1R10Q96QC0 940 aaKnown RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 PCDH12Q9NPG4 1184 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 UXTQ9UBK9 157 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 CAB39Q9Y376 341 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 SNX10Q9Y5X0 201 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 LRRC14BA6NHZ5 514 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 RGS5O15539 181 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 PYGMP11217 842 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 ADSLP30566 484 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 TUFMP49411 452 aaKnown RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 TRAF2Q12933 501 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 UGCGQ16739 394 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 POLNQ7Z5Q5 900 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 RPAINQ86UA6 219 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 P3H2Q8IVL5 708 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 ERP27Q96DN0 273 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 NLNQ9BYT8 704 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 RGS18Q9NS28 235 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 ADGRB3O60242 1522 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 IQCF5A8MTL0 148 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 PRR23D1E9PI22 279 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-201ENST00000303354 TRIM66O15016 1216 aa7.97□□□□□ -1.13
SCN9A-201ENST00000303354 RNASEH2AO75792 299 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms