RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CYP2A7P20853 494 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 MZF1P28698 734 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 RPL5P46777 297 aaKnown RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 TROAPQ12815 778 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 RFX4Q33E94 735 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 TCHHL1Q5QJ38 904 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 TMEM63BQ5T3F8 832 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 FAM228AQ86W67 206 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 LZTR1Q8N653 840 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 AMER2Q8N7J2 671 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 TATDN2Q93075 761 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 SEPT5Q99719 369 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 MTMR12Q9C0I1 747 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 MIEF1Q9NQG6 463 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ARHGAP23Q9P227 1491 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 IRGMA1A4Y4 181 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 NPTXRO95502 500 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 GYS1P13807 737 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 PAX7P23759 505 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 VPS72Q15906 364 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 RIPOR1Q6ZS17 1223 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 FBXO33Q7Z6M2 555 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 OR7A2PQ8NGA2 310 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ITFG1Q8TB96 612 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 TCP10LQ8TDR4 215 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ZCCHC2Q9C0B9 1178 aaKnown RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 CHST12Q9NRB3 414 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 KCNH1O95259 989 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 PTDSS1P48651 473 aaKnown RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 CCDC80Q76M96 950 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF720Q7Z2F6 126 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 HDAC7Q8WUI4 952 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 FIG4Q92562 907 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 RPRD1BQ9NQG5 326 aaKnown RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 MRPL39Q9NYK5 338 aaKnown RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 BTBD3Q9Y2F9 522 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 HOXA2O43364 376 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 RAB25P57735 213 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 NDUFAF6Q330K2 333 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 NFKBIL1Q9UBC1 381 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 ABT1Q9ULW3 272 aaKnown RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 ANKRD12Q6UB98 2062 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 FRMPD4Q14CM0 1322 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 MON2Q7Z3U7 1717 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 TMEM131LA2VDJ0 1609 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 RIMS1Q86UR5 1692 aaKnown RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 CARNS1A5YM72 827 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF268Q14587 947 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 NR6A1Q15406 480 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF618Q5T7W0 954 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.8□□□□□ -1.167e-6■■■□□ 16.3
SF3B3-201ENST00000302516 APOC4-APOC2K7ER74 178 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 APOC2P02655 101 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 ETS1P14921 441 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 RPL3P39023 403 aaKnown RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 NFIL3Q16649 462 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 CHMP1BQ7LBR1 199 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 NIPA1Q7RTP0 329 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF438Q7Z4V0 828 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 TBC1D16Q8TBP0 767 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 TBL1YQ9BQ87 522 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 SPAG4Q9NPE6 437 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 BARX2Q9UMQ3 279 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 INPP4BO15327 924 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 AP1G2O75843 785 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 ITGAVP06756 1048 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 LRPAP1P30533 357 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 RPL21P46778 160 aaKnown RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 SKP1P63208 163 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 NT5DC3Q86UY8 548 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 CLVS1Q8IUQ0 354 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 EPHX4Q8IUS5 362 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 FBXO39Q8N4B4 442 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 IL22Q9GZX6 179 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 AAASQ9NRG9 546 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 SPATA2Q9UM82 520 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 DUSP10Q9Y6W6 482 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 CNTNAP4Q9C0A0 1308 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 RGS14O43566 566 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 SERPINA6P08185 405 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 NUDT17P0C025 328 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 IL12AP29459 219 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 DLG4P78352 724 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 STX4Q12846 297 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 FAM187BQ17R55 369 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 TMEM119Q4V9L6 283 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 SWT1Q5T5J6 900 aaKnown RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 DEPDC4Q8N2C3 294 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 MLPHQ9BV36 600 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 AGXT2Q9BYV1 514 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 SHCBP1LQ9BZQ2 653 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 EPB41L4BQ9H329 900 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 NMRK2Q9NPI5 230 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 ANAPC2Q9UJX6 822 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 ZNRF3Q9ULT6 936 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 GSTK1Q9Y2Q3 226 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 CNPP09543 421 aaKnown RBP7.8□□□□□ -1.16
SF3B3-201ENST00000302516 UQCRBP14927 111 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 PRR5LQ6MZQ0 368 aa7.8□□□□□ -1.16
SF3B3-201ENST00000302516 FOXR2Q6PJQ5 311 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms