RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 TNNT1P13805 278 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 GOT1P17174 413 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 TACR2P21452 398 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 CDKN2BP42772 138 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 VCPP55072 806 aaKnown RBP9.81□□□□□ -0.84
RFX3-201ENST00000302303 DPYSQ14117 519 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 HADHQ16836 314 aaKnown RBP9.81□□□□□ -0.84
RFX3-201ENST00000302303 EML3Q32P44 896 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 ALFQ53S48 1182 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 FYB2Q5VWT5 728 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 PAPD7Q5XG87 772 aaKnown RBP9.81□□□□□ -0.84
RFX3-201ENST00000302303 TRIM68Q6AZZ1 485 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 RHBDF2Q6PJF5 856 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 MFSD7Q6UXD7 560 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 SYT10Q6XYQ8 523 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 SND1Q7KZF4 910 aaKnown RBP eCLIP9.81□□□□□ -0.84
RFX3-201ENST00000302303 NLRP14Q86W24 1093 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 DDX42Q86XP3 938 aaKnown RBP eCLIP9.81□□□□□ -0.84
RFX3-201ENST00000302303 TMEM25Q86YD3 366 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 PQLC3Q8N755 202 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 ATP6V0D2Q8N8Y2 350 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 OR52K2Q8NGK3 314 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 PCDH19Q8TAB3 1148 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 OSCP1Q8WVF1 389 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 UBE2Q2Q8WVN8 375 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 RNF34Q969K3 372 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 RPGRIP1Q96KN7 1286 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 DCLK3Q9C098 648 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 KLC2Q9H0B6 622 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 DHX35Q9H5Z1 703 aaKnown RBP9.81□□□□□ -0.84
RFX3-201ENST00000302303 KCNK12Q9HB15 430 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 HPS4Q9NQG7 708 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 NDFIP2Q9NV92 336 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 ETNK2Q9NVF9 386 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 LIMD1Q9UGP4 676 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 CLEC4EQ9ULY5 219 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 MFHAS1Q9Y4C4 1052 aa9.81□□□□□ -0.84
RFX3-201ENST00000302303 SHISA7A6NL88 538 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 MIF4GDA9UHW6 222 aaKnown RBP9.8□□□□□ -0.84
RFX3-201ENST00000302303 ESPNB1AK53 854 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 E9PAM4 449 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 ARSAP15289 507 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 GJC1P36383 396 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 SSR1P43307 286 aaKnown RBP9.8□□□□□ -0.84
RFX3-201ENST00000302303 HCAR3P49019 387 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 SLC11A2P49281 568 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 RPS24P62847 133 aaKnown RBP9.8□□□□□ -0.84
RFX3-201ENST00000302303 ZP2Q05996 745 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 TNK2Q07912 1038 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 ZNF211Q13398 564 aaPredicted RBP9.8□□□□□ -0.84
RFX3-201ENST00000302303 GRM2Q14416 872 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 RPS6KA1Q15418 735 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 PUS10Q3MIT2 529 aaKnown RBP9.8□□□□□ -0.84
RFX3-201ENST00000302303 IER5LQ5T953 404 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 CFAP52Q8N1V2 620 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 SLC44A3Q8N4M1 653 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 EXD1Q8NHP7 514 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 RNF25Q96BH1 459 aaPredicted RBP9.8□□□□□ -0.84
RFX3-201ENST00000302303 LMLNQ96KR4 655 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 C16orf45Q96MC5 204 aaPredicted RBP9.8□□□□□ -0.84
RFX3-201ENST00000302303 CSPG4P5Q96PW8 444 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 ALS2CR12Q96Q35 445 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 THEGQ9P2T0 379 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 VANGL2Q9ULK5 521 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 SH3BP1Q9Y3L3 701 aa9.8□□□□□ -0.84
RFX3-201ENST00000302303 COL4A3Q01955 1670 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 hCG_1818297A0A087WSY0 165 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 TCRBV7S2A1N4TA0A589 114 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 ZNF487B1APH4 448 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 DCLK1O15075 740 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 TSPAN3O60637 253 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 SRGAP2O75044 1071 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 ZRANB2O95218 330 aaKnown RBP eCLIP9.79□□□□□ -0.841e-6■■■■■ 42
RFX3-201ENST00000302303 PENKP01210 267 aaPredicted RBP9.79□□□□□ -0.84
RFX3-201ENST00000302303 ASGR2P07307 311 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 KRT10P13645 584 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 PRLRP16471 622 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 PSMC3P17980 439 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 AMPD1P23109 780 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 CXCR5P32302 372 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 CDH6P55285 790 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 RWDD2BP57060 319 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 MESP2Q0VG99 397 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 PDK2Q15119 407 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 LLGL1Q15334 1064 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 AAK1Q2M2I8 961 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 ARL13BQ3SXY8 428 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 ANKRD20A8PQ5CZ79 823 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 EFHC2Q5JST6 749 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 LY6G5CQ5SRR4 150 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 ASTLQ6HA08 431 aaPredicted RBP9.79□□□□□ -0.84
RFX3-201ENST00000302303 SPOCD1Q6ZMY3 1216 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 CIR1Q86X95 450 aaPredicted RBP9.79□□□□□ -0.84
RFX3-201ENST00000302303 VSIG1Q86XK7 387 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 TP53INP2Q8IXH6 220 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 RCOR2Q8IZ40 523 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 LGI2Q8N0V4 545 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 TDRD5Q8NAT2 981 aaKnown RBP9.79□□□□□ -0.84
RFX3-201ENST00000302303 TTC16Q8NEE8 873 aa9.79□□□□□ -0.84
RFX3-201ENST00000302303 WFDC5Q8TCV5 224 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms