RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 FAM47BQ8NA70 645 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 GMCL1P1Q8NEA9 526 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 C12orf43Q96C57 262 aaKnown RBP11.27□□□□□ -0.61
SNX20-201ENST00000300590 SLC29A1Q99808 456 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 MSTO1Q9BUK6 570 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 ST6GALNAC4Q9H4F1 302 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 DHX35Q9H5Z1 703 aaKnown RBP11.27□□□□□ -0.61
SNX20-201ENST00000300590 AGO4Q9HCK5 861 aaKnown RBP11.27□□□□□ -0.61
SNX20-201ENST00000300590 MYRFQ9Y2G1 1151 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 TRIM17Q9Y577 477 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 H6PDO95479 791 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 HMGCRP04035 888 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 ZNF23P17027 643 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 PRKCHP24723 683 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 NFKBIAP25963 317 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 KPNA1P52294 538 aaPredicted RBP11.27□□□□□ -0.61
SNX20-201ENST00000300590 OSTNP61366 133 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 SNRPFP62306 86 aaKnown RBP11.27□□□□□ -0.61
SNX20-201ENST00000300590 ESRRGP62508 458 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 GSTM4Q03013 218 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 MGAT5BQ3V5L5 792 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 DCAF6Q58WW2 860 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 MTX3Q5HYI7 312 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 TRAPPC3LQ5T215 181 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 C15orf52Q6ZUT6 534 aaKnown RBP11.27□□□□□ -0.61
SNX20-201ENST00000300590 TAS1R3Q7RTX0 852 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 GPR141Q7Z602 305 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 CATSPER1Q8NEC5 780 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 COX4I2Q96KJ9 171 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 RTKNQ9BST9 563 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 CEP41Q9BYV8 373 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 PLK2Q9NYY3 685 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 PAK5Q9P286 719 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 A0A1W2PPW3 197 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 K7EPI3 171 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 METTL18O95568 372 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 CPA3P15088 417 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 TSHRP16473 764 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 ME2P23368 584 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 EIF2B2P49770 351 aaKnown RBP11.26□□□□□ -0.61
SNX20-201ENST00000300590 BCAR1P56945 870 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 C21orf59P57076 290 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 NUP107P57740 925 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 MRPS9P82933 396 aaKnown RBP11.26□□□□□ -0.61
SNX20-201ENST00000300590 BNIP3Q12983 259 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 GPR107Q5VW38 600 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 PPP1R2P3Q6NXS1 205 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 LAYNQ6UX15 382 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 SNX31Q8N9S9 440 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 PPP1R14BQ96C90 147 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 MTMR12Q9C0I1 747 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 POLR3FQ9H1D9 316 aaPredicted RBP11.26□□□□□ -0.61
SNX20-201ENST00000300590 WDR41Q9HAD4 459 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 XPNPEP3Q9NQH7 507 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 FUOMA2VDF0 154 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 TRDMT1O14717 391 aaKnown RBP11.26□□□□□ -0.61
SNX20-201ENST00000300590 CHADO15335 359 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 NDUFB5O43674 189 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 SERPINB7O75635 380 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 CHRNGP07510 517 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 DPP6P42658 865 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 CDH8P55286 799 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 TFAMQ00059 246 aaKnown RBP11.26□□□□□ -0.61
SNX20-201ENST00000300590 FAM98CQ17RN3 349 aaKnown RBP11.26□□□□□ -0.61
SNX20-201ENST00000300590 SWSAP1Q6NVH7 229 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 CROCCP3Q8IVE0 287 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 LRRC43Q8N309 656 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 DDHD1Q8NEL9 900 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 DQX1Q8TE96 717 aaKnown RBP11.26□□□□□ -0.61
SNX20-201ENST00000300590 CPXM1Q96SM3 734 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 HAPLN2Q9GZV7 340 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 NOL11Q9H8H0 719 aaKnown RBP11.26□□□□□ -0.61
SNX20-201ENST00000300590 NGRNQ9NPE2 291 aaKnown RBP11.26□□□□□ -0.61
SNX20-201ENST00000300590 COPG2Q9UBF2 871 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 FBXO40Q9UH90 709 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 CYTH4Q9UIA0 394 aa11.26□□□□□ -0.61
SNX20-201ENST00000300590 SPTLC1O15269 473 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 TPST1O60507 370 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 ADAM23O75077 832 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 GLRA3O75311 464 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 ENTPD3O75355 529 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 CLIC3O95833 236 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 FUCA1P04066 466 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 KRT19P08727 400 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 TBXAS1P24557 533 aaPredicted RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 MPSTP25325 297 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 PHKA2P46019 1235 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 RPL26P61254 145 aaKnown RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 ZNF423Q2M1K9 1284 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 FAM102AQ5T9C2 384 aaPredicted RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 C16orf89Q6UX73 402 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 NAPRTQ6XQN6 538 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 SLC15A3Q8IY34 581 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 TDRD5Q8NAT2 981 aaKnown RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 TAAR1Q96RJ0 339 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 PEBP4Q96S96 227 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 EBNA1BP2Q99848 306 aaKnown RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 UNKQ9C0B0 810 aaKnown RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 DNAJC28Q9NX36 388 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 TCRBV5S1A1TA0A578 114 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms