RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 DEFB124Q8NES8 71 aa5.86□□□□□ -1.47
PATL1-201ENST00000300146 LRRN4Q8WUT4 740 aa5.86□□□□□ -1.47
PATL1-201ENST00000300146 SLC35F5Q8WV83 523 aa5.86□□□□□ -1.47
PATL1-201ENST00000300146 PRCCQ92733 491 aaPredicted RBP5.86□□□□□ -1.47
PATL1-201ENST00000300146 SPACA7Q96KW9 195 aa5.86□□□□□ -1.47
PATL1-201ENST00000300146 TKTL2Q9H0I9 626 aa5.86□□□□□ -1.47
PATL1-201ENST00000300146 WDCPQ9H6R7 721 aa5.86□□□□□ -1.47
PATL1-201ENST00000300146 SYNDIG1Q9H7V2 258 aa5.86□□□□□ -1.47
PATL1-201ENST00000300146 HSFX1Q9UBD0 423 aa5.86□□□□□ -1.47
PATL1-201ENST00000300146 CA5BQ9Y2D0 317 aa5.86□□□□□ -1.47
PATL1-201ENST00000300146 DSPP15924 2871 aaKnown RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 A0A1W2PP55 124 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 ACSL4O60488 711 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 SNAP91O60641 907 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 PABPC1P11940 636 aaKnown RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 PPP3CCP48454 512 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 ZNF542PQ5EBM4 170 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 ADGRF1Q5T601 910 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 DENND2CQ68D51 928 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 SND1Q7KZF4 910 aaKnown RBP eCLIP5.85□□□□□ -1.47
PATL1-201ENST00000300146 C14orf80Q86SX3 495 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 APCDD1Q8J025 514 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 ARHGAP18Q8N392 663 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 ATP11CQ8NB49 1132 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 EXOC2Q96KP1 924 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 DDX23Q9BUQ8 820 aaKnown RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 OSBPL2Q9H1P3 480 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 CYLDQ9NQC7 956 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 PCDHGA2Q9Y5H1 932 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 RALGAPA1Q6GYQ0 2036 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 TTC34A8MYJ7 566 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 K7ERQ8 282 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 DAPK3O43293 454 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 CNTN5O94779 1100 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 PCDH8O95206 1070 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 CYP11B1P15538 503 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 GKP32189 559 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 ACSL1P33121 698 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 FLT3P36888 993 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 ETFBP38117 255 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 CSKP41240 450 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 STAT1P42224 750 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 NSFP46459 744 aaKnown RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 KCNMA1Q12791 1236 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 PLK5Q496M5 336 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 KLHDC7AQ5VTJ3 777 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 CCDC186Q7Z3E2 898 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 ANKS1BQ7Z6G8 1248 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 NOP9Q86U38 636 aaKnown RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 OR7D4Q8NG98 312 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 LMO3Q8TAP4 145 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 CSNK1G1Q9HCP0 422 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 CNGB3Q9NQW8 809 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 ADAM22Q9P0K1 906 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 MOSPD1Q9UJG1 213 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 FBXO4Q9UKT5 387 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 MMP17Q9ULZ9 603 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 COQ4Q9Y3A0 265 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 SPAARA0A1B0GVQ0 90 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 KHNYNO15037 678 aaKnown RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 MAPK13O15264 365 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 STAU1O95793 577 aaKnown RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 TOP3BO95985 862 aaKnown RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 ATP5BP06576 529 aaKnown RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 GABRG2P18507 467 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 PRKCHP24723 683 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 RPS9P46781 194 aaKnown RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 PSEN1P49768 467 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 ZNF177Q13360 481 aaPredicted RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 PPM1JQ5JR12 505 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 ARHGAP17Q68EM7 881 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 PDCD6IPQ8WUM4 868 aaKnown RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 CAMK1GQ96NX5 476 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 DCLK3Q9C098 648 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 NAT10Q9H0A0 1025 aaKnown RBP5.85□□□□□ -1.47
PATL1-201ENST00000300146 POPDC2Q9HBU9 364 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 OBP2AQ9NY56 170 aa5.85□□□□□ -1.47
PATL1-201ENST00000300146 GOLGA6CA6NDK9 693 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 GOLGA6BA6NDN3 693 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 SDC3O75056 442 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 MT-CO1P00395 513 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 DNTTP04053 509 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 PAEPP09466 180 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 GOLGA6DP0CG33 693 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 PRLRP16471 622 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 LMAN2Q12907 356 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 MPPE1Q53F39 396 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 LYSMD4Q5XG99 296 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 KDM7AQ6ZMT4 941 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 HTR3DQ70Z44 454 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 SYT13Q7L8C5 426 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 LIMS2Q7Z4I7 341 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 GATAD2AQ86YP4 633 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 UNC45BQ8IWX7 931 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 TTC39CQ8N584 583 aa5.84□□□□□ -1.47
PATL1-201ENST00000300146 CELF6Q96J87 481 aaKnown RBP5.84□□□□□ -1.47
PATL1-201ENST00000300146 FCRL2Q96LA5 508 aaPredicted RBP5.84□□□□□ -1.47
PATL1-201ENST00000300146 TBCBQ99426 244 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms