RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 UGT2A3Q6UWM9 527 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 UBA3Q8TBC4 463 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 LZICQ8WZA0 190 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 WNK4Q96J92 1243 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 C17orf75Q9HAS0 396 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 PSMD13Q9UNM6 376 aa15.26■□□□□ 0.03
SPIDR-201ENST00000297423 TPP1O14773 563 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 ITGAVP06756 1048 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 ITGB5P18084 799 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 EIF4BP23588 611 aaKnown RBP15.25■□□□□ 0.03
SPIDR-201ENST00000297423 TRAF2Q12933 501 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 TMEM132BQ14DG7 1078 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 MOB2Q70IA6 237 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 ENOSF1Q7L5Y1 443 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 CHSY1Q86X52 802 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 AZIN2Q96A70 460 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 RMND5BQ96G75 393 aaPredicted RBP15.25■□□□□ 0.03
SPIDR-201ENST00000297423 PPP1R16BQ96T49 567 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 CCDC106Q9BWC9 280 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 FBXO40Q9UH90 709 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 EEF1DP29692 281 aaKnown RBP15.25■□□□□ 0.03
SPIDR-201ENST00000297423 KPNA1P52294 538 aaPredicted RBP15.25■□□□□ 0.03
SPIDR-201ENST00000297423 NME5P56597 212 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 TUT1Q9H6E5 874 aaKnown RBP15.25■□□□□ 0.03
SPIDR-201ENST00000297423 NUB1Q9Y5A7 615 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 ATP8B3O60423 1300 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.25■□□□□ 0.03
SPIDR-201ENST00000297423 GPC4O75487 556 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 TMEM191BP0C7N4 346 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 PCYT1AP49585 367 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 THOP1P52888 689 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 PDAP1Q13442 181 aaKnown RBP15.25■□□□□ 0.03
SPIDR-201ENST00000297423 MTX3Q5HYI7 312 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 TDRD10Q5VZ19 366 aaKnown RBP15.25■□□□□ 0.03
SPIDR-201ENST00000297423 TMEM198Q66K66 360 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 KCTD17Q8N5Z5 321 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 DNAAF3Q8N9W5 541 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 FAM47BQ8NA70 645 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 KYQ8NBH2 561 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 ZC3H15Q8WU90 426 aaKnown RBP15.25■□□□□ 0.03
SPIDR-201ENST00000297423 ATP6V1E2Q96A05 226 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 CDHR1Q96JP9 859 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 PKP2Q99959 881 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 GTSE1Q9NYZ3 720 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 DRG1Q9Y295 367 aaKnown RBP15.25■□□□□ 0.03
SPIDR-201ENST00000297423 TRIM17Q9Y577 477 aa15.25■□□□□ 0.03
SPIDR-201ENST00000297423 CROCCQ5TZA2 2017 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 NFKBIAP25963 317 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 GRIA1P42261 906 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 SLC18A1P54219 525 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 TBCCQ15814 346 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 ZBTB49Q6ZSB9 765 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 NAT8LQ8N9F0 302 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 NPAS2Q99743 824 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 SLC4A5Q9BY07 1137 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 MYO18AQ92614 2054 aaKnown RBP15.24■□□□□ 0.03
SPIDR-201ENST00000297423 ZNF646O15015 1829 aaPredicted RBP15.24■□□□□ 0.03
SPIDR-201ENST00000297423 WDR27A2RRH5 827 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 ZBTB11O95625 1053 aaPredicted RBP15.24■□□□□ 0.03
SPIDR-201ENST00000297423 RXRGP48443 463 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 ZBTB41Q5SVQ8 909 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 TRIM72Q6ZMU5 477 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 CPNE9Q8IYJ1 553 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 C7orf26Q96N11 449 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 CCDC28BQ9BUN5 200 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 KLHL25Q9H0H3 589 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 TCF7L2Q9NQB0 619 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 GLTPD2A6NH11 291 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 CAPN14A8MX76 684 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 KDELR1P24390 212 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 CASP2P42575 452 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 ETV4P43268 484 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 SLC9A4Q6AI14 798 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 NIPA1Q7RTP0 329 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 MCUQ8NE86 351 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 OR5B17Q8NGF7 314 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 CASP10Q92851 521 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 PGLYRP2Q96PD5 576 aa15.24■□□□□ 0.03
SPIDR-201ENST00000297423 OXCT2Q9BYC2 517 aaPredicted RBP15.24■□□□□ 0.03
SPIDR-201ENST00000297423 POLR3FQ9H1D9 316 aaPredicted RBP15.24■□□□□ 0.03
SPIDR-201ENST00000297423 AGO4Q9HCK5 861 aaKnown RBP15.24■□□□□ 0.03
SPIDR-201ENST00000297423 BARX2Q9UMQ3 279 aaPredicted RBP15.24■□□□□ 0.03
SPIDR-201ENST00000297423 SPTLC1O15269 473 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 CKMT2P17540 419 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 IL1R2P27930 398 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 IDH3AP50213 366 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 KRT76Q01546 638 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 TRIM16LQ309B1 348 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 XRRA1Q6P2D8 792 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 IFNLR1Q8IU57 520 aaPredicted RBP15.23■□□□□ 0.03
SPIDR-201ENST00000297423 RNF135Q8IUD6 432 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 MPP5Q8N3R9 675 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.23■□□□□ 0.03
SPIDR-201ENST00000297423 NAT16Q8N8M0 369 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 PCDHAC1Q9H158 963 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 COG4Q9H9E3 785 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 PLGRKTQ9HBL7 147 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 TIMMDC1Q9NPL8 285 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 MYRFQ9Y2G1 1151 aa15.23■□□□□ 0.03
SPIDR-201ENST00000297423 TMEM191CA6NGB0 347 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms