RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 SPANXN3Q5MJ09 141 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 RASGEF1CQ8N431 466 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 OR6Y1Q8NGX8 325 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 PYDC1Q8WXC3 89 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 LRRC39Q96DD0 335 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 ERVK-5Q9HDB9 667 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 CRLS1Q9UJA2 301 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 MROH7Q68CQ1 1323 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 C2orf81A6NN90 581 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 VPS26AO75436 327 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 BANF1O75531 89 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 AMHP03971 560 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 PTDSS1P48651 473 aaKnown RBP16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 TBCELQ5QJ74 424 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 TMEM161BQ8NDZ6 487 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 TRAPPC9Q96Q05 1148 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 PALMDQ9NP74 551 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 SLCO1B3Q9NPD5 702 aa16.42■□□□□ 0.22
ARHGEF28-201ENST00000296794 SLC12A8A0AV02 714 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 TOMM70O94826 608 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 LCA5LO95447 670 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 RPL22P35268 128 aaKnown RBP16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 CD151P48509 253 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 CSE1LP55060 971 aaKnown RBP16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 EFEMP1Q12805 493 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 ZDHHC17Q8IUH5 632 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 PHF21BQ96EK2 531 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 HSD17B14Q9BPX1 270 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 ETNK2Q9NVF9 386 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 VTI1BQ9UEU0 232 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 LACTBL1A8MY62 500 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 HYIQ5T013 277 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 CACHD1Q5VU97 1274 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 HS6ST3Q8IZP7 471 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 OTULINQ96BN8 352 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 CDRT15Q96T59 188 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 SLC15A5A6NIM6 579 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 ADIGQ0VDE8 80 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 UGT3A1Q6NUS8 523 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 NPNTQ6UXI9 565 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 OTUB1Q96FW1 271 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 SYT15Q9BQS2 421 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 BRD8Q9H0E9 1235 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 TRPV2Q9Y5S1 764 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 A0A0B4J269 797 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 PPP3CCP48454 512 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 SLC6A3Q01959 620 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 PTAR1Q7Z6K3 402 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 TMCO5AQ8N6Q1 288 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 RIN3Q8TB24 985 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 TRAPPC12Q8WVT3 735 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 MPP4Q96JB8 637 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 PURBQ96QR8 312 aaKnown RBP16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 PCDHB5Q9Y5E4 795 aa16.41■□□□□ 0.22
ARHGEF28-201ENST00000296794 SIGLEC16A6NMB1 481 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 CHADO15335 359 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 BAIAP3O94812 1187 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 ME2P23368 584 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 CDK7P50613 346 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 LPCAT2Q7L5N7 544 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 SLC22A9Q8IVM8 553 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 SALL4Q9UJQ4 1053 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 MYPNQ86TC9 1320 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 TBC1D12O60347 775 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 PIAS1O75925 651 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 NOL4O94818 638 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 KPNA1P52294 538 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 DEFA1P59665 94 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 DEFA3P59666 94 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 RUNX1T1Q06455 604 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 ATP6AP1LQ52LC2 224 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 ARMC6Q6NXE6 501 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 VPS37AQ8NEZ2 397 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 MIEF2Q96C03 454 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 DDX43Q9NXZ2 648 aaKnown RBP16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 ROBO3Q96MS0 1386 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 TNFAIP8O95379 198 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 NUMBP49757 651 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 NCALDP61601 193 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 YWHAZP63104 245 aaKnown RBP16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 WASHC5Q12768 1159 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 NT5MQ9NPB1 228 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 RBM22Q9NW64 420 aaKnown RBP eCLIP16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 ZMYM2Q9UBW7 1377 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 KLRC2P26717 231 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 PKN3Q6P5Z2 889 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 ZNF398Q8TD17 642 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 SLC25A13Q9UJS0 675 aa16.4■□□□□ 0.22
ARHGEF28-201ENST00000296794 SHOX2O60902 331 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 MYL4P12829 197 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 GLRA2P23416 452 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 MLH1P40692 756 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 C15orf59Q2T9L4 293 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 VSIG10LQ86VR7 867 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 EDEM1Q92611 657 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 SEMA4DQ92854 862 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 CROTQ9UKG9 612 aa16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 ATXN2Q99700 1313 aaKnown RBP16.39■□□□□ 0.21
ARHGEF28-201ENST00000296794 CARNS1A5YM72 827 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms